PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
Pvir01KG0000850.1 Alkaloid IO medium borderline
Pvir01KG0000850.2 Alkaloid IO medium borderline
Pvir01KG0011360.1 Alkaloid IO medium borderline
Pvir01KG0011360.2 Alkaloid IO medium borderline
Pvir02KG0004920.1 Alkaloid IO medium borderline
Pvir02NG0032210.1 Alkaloid IO medium borderline
Pvir02NG0032210.2 Alkaloid IO medium borderline
Pvir03KG0036290.1 Alkaloid IO medium borderline
Pvir03KG0048320.1 Alkaloid IO medium borderline
Pvir03NG0033690.1 Alkaloid IO medium borderline
Pvir03NG0044060.1 Alkaloid IO medium borderline
Pvir04KG0016370.1 Alkaloid IO medium pass
Pvir04NG0002000.3 Alkaloid IO medium borderline
Pvir04NG0002000.4 Alkaloid IO medium borderline
Pvir04NG0014840.1 Alkaloid IO medium pass
Pvir04NG0014870.1 Alkaloid IO medium pass
Pvir04NG0019930.1 Alkaloid IO low borderline
Pvir04NG0023450.1 Alkaloid IO medium borderline
Pvir05KG0001000.1 Alkaloid IO medium borderline
Pvir05KG0013040.1 Alkaloid IO medium borderline
Pvir05KG0013050.1 Alkaloid IO medium borderline
Pvir05KG0042020.1 Alkaloid IO medium borderline
Pvir05NG0012910.1 Alkaloid IO medium borderline
Pvir05NG0033240.1 Alkaloid IO medium borderline
Pvir05NG0033240.2 Alkaloid IO medium borderline
Pvir06KG0023720.1 Alkaloid IO medium borderline
Pvir06NG0003590.2 Alkaloid IO medium borderline
Pvir06NG0022170.1 Alkaloid IO medium borderline
Pvir06NG0029310.1 Alkaloid IO medium borderline
Pvir06NG0029310.3 Alkaloid IO medium borderline
Pvir06NG0029310.4 Alkaloid IO medium borderline
Pvir07KG0027320.6 Alkaloid IO medium borderline
Pvir08KG0011200.1 Alkaloid IO medium borderline
Pvir09KG0019300.1 Alkaloid IO medium pass
Pvir09KG0019310.1 Alkaloid IO medium pass
Pvir09KG0031480.3 Alkaloid IO medium borderline
Pvir09KG0043070.1 Alkaloid IO medium borderline
Pvir09KG0048450.1 Alkaloid IO medium borderline
Pvir09KG0052430.1 Alkaloid IO low borderline
Pvir09KG0052430.3 Alkaloid IO low borderline
Pvir09KG0059740.1 Alkaloid IO low borderline
Pvir09KG0060220.1 Alkaloid IO medium borderline
Pvir09NG0019370.1 Alkaloid IO medium pass
Pvir09NG0038950.2 Alkaloid IO low borderline
Pvir09NG0042470.1 Alkaloid IO medium borderline
Pvir09NG0052000.3 Alkaloid IO low borderline
Pvir09NG0052000.4 Alkaloid IO low borderline
Pvir09NG0052000.5 Alkaloid IO low borderline
Pvir09NG0059600.1 Alkaloid IO low borderline
Pvir09NG0059600.2 Alkaloid IO low borderline