PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
Pvir07KG0026390.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Pvir07NG0024630.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Pvir08KG0000510.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Pvir08KG0004410.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir08KG0010620.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir08KG0030470.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Pvir08KG0030500.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir08KG0030520.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir08KG0030530.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir08KG0030550.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir08KG0030580.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir08KG0030600.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir08KG0030610.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir08KG0030620.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir08KG0030630.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir08NG0000550.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Pvir08NG0023480.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir08NG0023540.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir08NG0023580.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir08NG0023590.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir08NG0023610.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir08NG0023620.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir08NG0023640.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir08NG0023650.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir08NG0023660.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir08NG0023670.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir08NG0023680.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Pvir09KG0045130.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Pvir09KG0047570.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Pvir09KG0049480.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Pvir09KG0049480.2 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Pvir09NG0047150.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Pvir09NG0048950.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH