PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status Best Target
Pvir07NG0019460.1 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pvir07NG0019460.2 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pvir07NG0019480.1 Rosmarinic Acid RAS medium pass RAS__00001__sp_A0PDV5_RAS_PLESU
Pvir07NG0028330.1 Rosmarinic Acid RAS low borderline RAS__00002__sp_G0LD36_RAS_MELOI
Pvir07NG0033210.1 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pvir08KG0009900.1 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pvir08KG0009990.1 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pvir08KG0010030.1 Rosmarinic Acid RAS low borderline RAS__00002__sp_G0LD36_RAS_MELOI
Pvir08KG0014390.1 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pvir08KG0014480.1 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pvir08KG0014560.1 Rosmarinic Acid RAS low borderline RAS__00002__sp_G0LD36_RAS_MELOI
Pvir08KG0014590.1 Rosmarinic Acid RAS low borderline RAS__00002__sp_G0LD36_RAS_MELOI
Pvir08KG0017980.1 Rosmarinic Acid RAS medium pass RAS__00001__sp_A0PDV5_RAS_PLESU
Pvir08KG0019720.1 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pvir08KG0019720.2 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pvir08KG0019740.1 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pvir08KG0028850.1 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pvir08NG0011960.1 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pvir08NG0015200.1 Rosmarinic Acid RAS medium pass RAS__00001__sp_A0PDV5_RAS_PLESU
Pvir08NG0021890.1 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pvir08NG0026340.1 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pvir09KG0021080.1 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pvir09KG0031230.1 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pvir09NG0014090.1 Rosmarinic Acid RAS medium pass RAS__00001__sp_A0PDV5_RAS_PLESU