PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
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Gene Pathway Family Confidence Status
Pvir05KG0029310.2 Alkaloid SLS medium borderline
Pvir05KG0029320.1 Alkaloid SLS medium borderline
Pvir05KG0029360.1 Alkaloid SLS medium borderline
Pvir05KG0029360.2 Alkaloid SLS medium borderline
Pvir05KG0029360.3 Alkaloid SLS medium borderline
Pvir05KG0029370.1 Alkaloid SLS medium borderline
Pvir05KG0029530.1 Alkaloid SLS medium borderline
Pvir05KG0029540.1 Alkaloid SLS medium borderline
Pvir05KG0029540.2 Alkaloid SLS medium borderline
Pvir05KG0029550.1 Alkaloid SLS medium borderline
Pvir05KG0029560.1 Alkaloid SLS medium borderline
Pvir05KG0029570.1 Alkaloid SLS medium borderline
Pvir05KG0029580.1 Alkaloid SLS medium borderline
Pvir05KG0029590.1 Alkaloid SLS medium borderline
Pvir05KG0029590.2 Alkaloid SLS medium borderline
Pvir05KG0029610.1 Alkaloid SLS medium borderline
Pvir05KG0029620.1 Alkaloid SLS medium borderline
Pvir05KG0029650.1 Alkaloid SLS medium borderline
Pvir05NG0005340.1 Alkaloid SLS medium borderline
Pvir05NG0017510.1 Alkaloid SLS medium borderline
Pvir05NG0017510.2 Alkaloid SLS medium borderline
Pvir05NG0017670.1 Alkaloid SLS medium borderline
Pvir05NG0017670.2 Alkaloid SLS medium borderline
Pvir05NG0028130.1 Alkaloid SLS medium borderline
Pvir05NG0028140.1 Alkaloid SLS medium borderline
Pvir05NG0028170.1 Alkaloid SLS medium borderline
Pvir05NG0028180.1 Alkaloid SLS medium borderline
Pvir05NG0028190.1 Alkaloid SLS medium borderline
Pvir05NG0028190.2 Alkaloid SLS medium borderline
Pvir05NG0028190.3 Alkaloid SLS medium borderline
Pvir05NG0028190.6 Alkaloid SLS medium borderline
Pvir05NG0028190.7 Alkaloid SLS medium borderline
Pvir05NG0028200.1 Alkaloid SLS medium borderline
Pvir05NG0028210.1 Alkaloid SLS medium borderline
Pvir05NG0028210.2 Alkaloid SLS medium borderline
Pvir05NG0028210.3 Alkaloid SLS medium borderline
Pvir05NG0028240.1 Alkaloid SLS medium borderline
Pvir05NG0028250.1 Alkaloid SLS medium borderline
Pvir05NG0028270.1 Alkaloid SLS low borderline
Pvir05NG0028280.1 Alkaloid SLS medium borderline
Pvir05NG0028290.1 Alkaloid SLS medium borderline
Pvir05NG0028310.1 Alkaloid SLS medium borderline
Pvir05NG0028320.1 Alkaloid SLS medium borderline
Pvir05NG0028330.1 Alkaloid SLS medium borderline
Pvir05NG0028350.1 Alkaloid SLS medium borderline
Pvir05NG0033250.1 Alkaloid SLS medium borderline
Pvir05NG0043570.1 Alkaloid SLS medium borderline
Pvir06KG0020630.1 Alkaloid SLS medium borderline
Pvir06NG0018740.1 Alkaloid SLS medium borderline
Pvir07KG0027320.1 Alkaloid SLS medium borderline