PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
Pvir01KG0019290.1 Alkaloid T16H medium borderline
Pvir01NG0006890.1 Alkaloid T16H medium borderline
Pvir01NG0014810.1 Alkaloid T16H medium borderline
Pvir01NG0018420.1 Alkaloid T16H medium borderline
Pvir01NG0021280.1 Alkaloid T16H medium pass
Pvir01NG0024330.1 Alkaloid T16H medium borderline
Pvir02KG0020980.1 Alkaloid T16H medium borderline
Pvir02KG0044580.1 Alkaloid T16H medium borderline
Pvir02NG0041220.1 Alkaloid T16H medium borderline
Pvir03KG0015170.1 Alkaloid T16H low borderline
Pvir03KG0022800.1 Alkaloid T16H medium borderline
Pvir03KG0036980.1 Alkaloid T16H medium borderline
Pvir03NG0021300.1 Alkaloid T16H medium borderline
Pvir03NG0021320.1 Alkaloid T16H medium borderline
Pvir03NG0023080.2 Alkaloid T16H medium borderline
Pvir03NG0027400.1 Alkaloid T16H medium borderline
Pvir04KG0013800.1 Alkaloid T16H medium borderline
Pvir04KG0028120.1 Alkaloid T16H medium borderline
Pvir04KG0028140.1 Alkaloid T16H medium borderline
Pvir04KG0031760.2 Alkaloid T16H low borderline
Pvir04NG0002000.2 Alkaloid T16H low borderline
Pvir04NG0024710.1 Alkaloid T16H medium borderline
Pvir05KG0001030.1 Alkaloid T16H medium borderline
Pvir05KG0034300.2 Alkaloid T16H medium borderline
Pvir05KG0043320.1 Alkaloid T16H medium borderline
Pvir05KG0053420.1 Alkaloid T16H medium borderline
Pvir05NG0001060.1 Alkaloid T16H medium borderline
Pvir05NG0042420.1 Alkaloid T16H medium borderline
Pvir05NG0052740.1 Alkaloid T16H medium borderline
Pvir06KG0000420.1 Alkaloid T16H medium borderline
Pvir06KG0000660.2 Alkaloid T16H medium borderline
Pvir06KG0003560.1 Alkaloid T16H medium borderline
Pvir06KG0006790.1 Alkaloid T16H medium borderline
Pvir06KG0029700.1 Alkaloid T16H medium borderline
Pvir06KG0030650.1 Alkaloid T16H medium borderline
Pvir06NG0000660.1 Alkaloid T16H medium borderline
Pvir06NG0003590.1 Alkaloid T16H medium borderline
Pvir06NG0021630.1 Alkaloid T16H medium borderline
Pvir06NG0029450.2 Alkaloid T16H medium borderline
Pvir07KG0013550.1 Alkaloid T16H medium borderline
Pvir07KG0027320.4 Alkaloid T16H low borderline
Pvir07NG0003650.1 Alkaloid T16H medium borderline
Pvir07NG0007490.1 Alkaloid T16H medium borderline
Pvir07NG0011770.1 Alkaloid T16H medium borderline
Pvir07NG0017830.1 Alkaloid T16H medium borderline
Pvir07NG0019430.1 Alkaloid T16H medium borderline
Pvir08KG0019780.1 Alkaloid T16H medium borderline
Pvir08KG0019780.2 Alkaloid T16H medium borderline
Pvir08KG0024500.1 Alkaloid T16H medium borderline
Pvir08NG0001660.1 Alkaloid T16H low borderline