PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Pvir02KG0020950.1 Alkaloid T3O medium borderline
Pvir02KG0020950.2 Alkaloid T3O medium borderline
Pvir02KG0020980.2 Alkaloid T3O medium borderline
Pvir02KG0023340.1 Alkaloid T3O medium borderline
Pvir02KG0024930.1 Alkaloid T3O medium borderline
Pvir02KG0025680.1 Alkaloid T3O medium borderline
Pvir02KG0026580.1 Alkaloid T3O medium borderline
Pvir02KG0028060.1 Alkaloid T3O medium borderline
Pvir02KG0028070.1 Alkaloid T3O medium borderline
Pvir02KG0028080.1 Alkaloid T3O medium borderline
Pvir02KG0028110.1 Alkaloid T3O medium borderline
Pvir02KG0028610.1 Alkaloid T3O medium borderline
Pvir02KG0029160.1 Alkaloid T3O medium pass
Pvir02KG0034980.1 Alkaloid T3O medium pass
Pvir02KG0034980.2 Alkaloid T3O medium borderline
Pvir02KG0034980.3 Alkaloid T3O medium borderline
Pvir02KG0035090.1 Alkaloid T3O medium borderline
Pvir02KG0040910.1 Alkaloid T3O medium pass
Pvir02KG0040930.1 Alkaloid T3O medium pass
Pvir02KG0040930.2 Alkaloid T3O medium pass
Pvir02KG0046560.1 Alkaloid T3O medium borderline
Pvir02KG0051000.1 Alkaloid T3O medium borderline
Pvir02KG0051000.2 Alkaloid T3O medium borderline
Pvir02KG0051000.3 Alkaloid T3O medium borderline
Pvir02NG0004100.1 Alkaloid T3O medium borderline
Pvir02NG0006300.1 Alkaloid T3O low borderline
Pvir02NG0006680.1 Alkaloid T3O medium borderline
Pvir02NG0008500.1 Alkaloid T3O medium pass
Pvir02NG0010840.1 Alkaloid T3O medium pass
Pvir02NG0011650.1 Alkaloid T3O medium borderline
Pvir02NG0011650.2 Alkaloid T3O medium borderline
Pvir02NG0012160.1 Alkaloid T3O medium borderline
Pvir02NG0015860.1 Alkaloid T3O medium borderline
Pvir02NG0018400.1 Alkaloid T3O medium borderline
Pvir02NG0018430.1 Alkaloid T3O medium borderline
Pvir02NG0018430.2 Alkaloid T3O medium borderline
Pvir02NG0020580.1 Alkaloid T3O medium borderline
Pvir02NG0020800.1 Alkaloid T3O medium borderline
Pvir02NG0022280.1 Alkaloid T3O medium borderline
Pvir02NG0025280.1 Alkaloid T3O medium borderline
Pvir02NG0025290.1 Alkaloid T3O medium borderline
Pvir02NG0025290.2 Alkaloid T3O medium borderline
Pvir02NG0025300.1 Alkaloid T3O medium borderline
Pvir02NG0025310.1 Alkaloid T3O medium borderline
Pvir02NG0025760.1 Alkaloid T3O medium borderline
Pvir02NG0026380.1 Alkaloid T3O medium pass
Pvir02NG0032350.1 Alkaloid T3O medium borderline
Pvir02NG0032350.2 Alkaloid T3O medium borderline
Pvir02NG0038050.1 Alkaloid T3O medium pass
Pvir02NG0038090.1 Alkaloid T3O medium pass