PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
Pvir06KG0001770.2 Alkaloid T3O low borderline
Pvir06KG0005250.1 Alkaloid T3O medium borderline
Pvir06KG0005250.2 Alkaloid T3O medium borderline
Pvir06KG0006740.1 Alkaloid T3O medium borderline
Pvir06KG0006760.1 Alkaloid T3O medium borderline
Pvir06KG0006770.1 Alkaloid T3O medium borderline
Pvir06KG0006810.1 Alkaloid T3O medium borderline
Pvir06KG0006830.1 Alkaloid T3O medium borderline
Pvir06KG0006840.1 Alkaloid T3O medium borderline
Pvir06KG0006870.1 Alkaloid T3O medium borderline
Pvir06KG0006880.1 Alkaloid T3O medium borderline
Pvir06KG0006890.1 Alkaloid T3O medium borderline
Pvir06KG0006900.1 Alkaloid T3O medium borderline
Pvir06KG0006910.1 Alkaloid T3O medium borderline
Pvir06KG0006920.1 Alkaloid T3O medium borderline
Pvir06KG0006930.1 Alkaloid T3O medium borderline
Pvir06KG0006940.1 Alkaloid T3O medium borderline
Pvir06KG0006960.1 Alkaloid T3O medium borderline
Pvir06KG0006980.1 Alkaloid T3O medium borderline
Pvir06KG0012430.1 Alkaloid T3O medium borderline
Pvir06KG0012430.2 Alkaloid T3O medium borderline
Pvir06KG0015330.1 Alkaloid T3O medium borderline
Pvir06KG0019670.1 Alkaloid T3O medium borderline
Pvir06KG0019810.1 Alkaloid T3O medium borderline
Pvir06KG0023230.1 Alkaloid T3O medium borderline
Pvir06KG0030530.1 Alkaloid T3O medium pass
Pvir06NG0000640.1 Alkaloid T3O medium borderline
Pvir06NG0000650.1 Alkaloid T3O medium borderline
Pvir06NG0000670.1 Alkaloid T3O medium borderline
Pvir06NG0000770.1 Alkaloid T3O medium borderline
Pvir06NG0001980.1 Alkaloid T3O medium pass
Pvir06NG0005400.1 Alkaloid T3O medium borderline
Pvir06NG0005410.1 Alkaloid T3O medium borderline
Pvir06NG0006640.1 Alkaloid T3O medium borderline
Pvir06NG0007020.1 Alkaloid T3O medium borderline
Pvir06NG0007020.2 Alkaloid T3O medium borderline
Pvir06NG0007020.3 Alkaloid T3O medium borderline
Pvir06NG0007050.1 Alkaloid T3O medium borderline
Pvir06NG0011860.1 Alkaloid T3O medium borderline
Pvir06NG0012610.1 Alkaloid T3O medium borderline
Pvir06NG0013280.1 Alkaloid T3O medium borderline
Pvir06NG0017920.1 Alkaloid T3O medium borderline
Pvir06NG0018810.1 Alkaloid T3O medium borderline
Pvir06NG0021650.1 Alkaloid T3O medium borderline
Pvir06NG0021660.1 Alkaloid T3O medium borderline
Pvir06NG0029450.1 Alkaloid T3O medium borderline
Pvir07KG0001040.1 Alkaloid T3O medium borderline
Pvir07KG0001090.1 Alkaloid T3O medium borderline
Pvir07KG0006440.1 Alkaloid T3O high pass
Pvir07KG0007990.1 Alkaloid T3O medium borderline