PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
Pvir07KG0008010.1 Alkaloid T3O medium borderline
Pvir07KG0015860.1 Alkaloid T3O low borderline
Pvir07KG0018930.1 Alkaloid T3O medium pass
Pvir07KG0018930.2 Alkaloid T3O low borderline
Pvir07KG0018930.3 Alkaloid T3O medium pass
Pvir07KG0021410.1 Alkaloid T3O medium borderline
Pvir07KG0021420.1 Alkaloid T3O medium borderline
Pvir07KG0026210.1 Alkaloid T3O low borderline
Pvir07KG0027030.1 Alkaloid T3O medium pass
Pvir07KG0027040.1 Alkaloid T3O medium pass
Pvir07KG0027300.1 Alkaloid T3O medium pass
Pvir07KG0034740.1 Alkaloid T3O medium borderline
Pvir07NG0001420.1 Alkaloid T3O medium borderline
Pvir07NG0004960.1 Alkaloid T3O medium borderline
Pvir07NG0008120.1 Alkaloid T3O medium borderline
Pvir07NG0008740.1 Alkaloid T3O medium borderline
Pvir07NG0017000.1 Alkaloid T3O medium pass
Pvir07NG0019420.1 Alkaloid T3O medium borderline
Pvir07NG0019560.1 Alkaloid T3O medium borderline
Pvir07NG0024460.1 Alkaloid T3O low borderline
Pvir07NG0025210.1 Alkaloid T3O medium pass
Pvir07NG0025340.1 Alkaloid T3O medium pass
Pvir08KG0001170.1 Alkaloid T3O medium pass
Pvir08KG0003080.1 Alkaloid T3O medium pass
Pvir08KG0011150.1 Alkaloid T3O medium borderline
Pvir08KG0011150.2 Alkaloid T3O medium borderline
Pvir08KG0011220.1 Alkaloid T3O medium borderline
Pvir08KG0011230.1 Alkaloid T3O medium borderline
Pvir08KG0011230.2 Alkaloid T3O medium borderline
Pvir08KG0011230.3 Alkaloid T3O medium borderline
Pvir08KG0011250.1 Alkaloid T3O medium borderline
Pvir08KG0011650.1 Alkaloid T3O medium borderline
Pvir08KG0011650.2 Alkaloid T3O medium borderline
Pvir08KG0012800.1 Alkaloid T3O low borderline
Pvir08KG0012810.1 Alkaloid T3O medium pass
Pvir08KG0015060.1 Alkaloid T3O medium pass
Pvir08KG0018860.1 Alkaloid T3O medium borderline
Pvir08KG0022940.1 Alkaloid T3O medium pass
Pvir08KG0031230.1 Alkaloid T3O medium borderline
Pvir08KG0031520.1 Alkaloid T3O medium borderline
Pvir08NG0001950.1 Alkaloid T3O medium pass
Pvir08NG0001950.2 Alkaloid T3O medium pass
Pvir08NG0006180.1 Alkaloid T3O medium borderline
Pvir08NG0008840.1 Alkaloid T3O medium borderline
Pvir08NG0008840.2 Alkaloid T3O medium borderline
Pvir08NG0010520.1 Alkaloid T3O medium pass
Pvir08NG0012350.1 Alkaloid T3O medium pass
Pvir08NG0016630.3 Alkaloid T3O low borderline
Pvir08NG0016630.5 Alkaloid T3O low borderline
Pvir08NG0024740.1 Alkaloid T3O medium borderline