PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
Pvir09KG0049700.4 Alkaloid T3O medium pass
Pvir09KG0049710.1 Alkaloid T3O medium pass
Pvir09KG0051370.1 Alkaloid T3O medium borderline
Pvir09KG0051370.2 Alkaloid T3O medium borderline
Pvir09KG0052430.2 Alkaloid T3O medium pass
Pvir09KG0057530.1 Alkaloid T3O low borderline
Pvir09KG0059750.1 Alkaloid T3O low borderline
Pvir09NG0002120.1 Alkaloid T3O medium pass
Pvir09NG0007760.1 Alkaloid T3O low borderline
Pvir09NG0008250.1 Alkaloid T3O medium borderline
Pvir09NG0008260.1 Alkaloid T3O medium borderline
Pvir09NG0008270.1 Alkaloid T3O medium borderline
Pvir09NG0008270.2 Alkaloid T3O medium borderline
Pvir09NG0009660.1 Alkaloid T3O medium borderline
Pvir09NG0013400.1 Alkaloid T3O medium borderline
Pvir09NG0018070.1 Alkaloid T3O medium pass
Pvir09NG0018580.1 Alkaloid T3O medium borderline
Pvir09NG0019150.1 Alkaloid T3O medium pass
Pvir09NG0019360.1 Alkaloid T3O medium pass
Pvir09NG0020040.1 Alkaloid T3O medium borderline
Pvir09NG0020060.1 Alkaloid T3O medium borderline
Pvir09NG0020480.1 Alkaloid T3O medium borderline
Pvir09NG0022400.1 Alkaloid T3O medium pass
Pvir09NG0022400.3 Alkaloid T3O medium pass
Pvir09NG0025290.1 Alkaloid T3O medium borderline
Pvir09NG0025580.1 Alkaloid T3O medium borderline
Pvir09NG0027810.1 Alkaloid T3O medium borderline
Pvir09NG0028740.1 Alkaloid T3O medium pass
Pvir09NG0028740.2 Alkaloid T3O medium pass
Pvir09NG0029660.1 Alkaloid T3O medium borderline
Pvir09NG0031330.1 Alkaloid T3O medium borderline
Pvir09NG0036340.1 Alkaloid T3O medium pass
Pvir09NG0037540.1 Alkaloid T3O medium pass
Pvir09NG0038820.1 Alkaloid T3O medium borderline
Pvir09NG0038930.1 Alkaloid T3O medium pass
Pvir09NG0038930.2 Alkaloid T3O medium pass
Pvir09NG0038930.3 Alkaloid T3O low borderline
Pvir09NG0038930.4 Alkaloid T3O medium pass
Pvir09NG0038950.1 Alkaloid T3O medium pass
Pvir09NG0038960.1 Alkaloid T3O medium pass
Pvir09NG0038960.2 Alkaloid T3O medium pass
Pvir09NG0038960.3 Alkaloid T3O medium pass
Pvir09NG0039310.1 Alkaloid T3O medium borderline
Pvir09NG0042490.1 Alkaloid T3O medium borderline
Pvir09NG0042500.1 Alkaloid T3O medium borderline
Pvir09NG0042510.1 Alkaloid T3O medium borderline
Pvir09NG0042510.2 Alkaloid T3O medium borderline
Pvir09NG0044800.1 Alkaloid T3O medium pass
Pvir09NG0049140.1 Alkaloid T3O medium pass
Pvir09NG0049170.1 Alkaloid T3O medium pass