PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir03KG0036290.1 Steroid CPD/CYP90A1 medium borderline
Pvir03KG0039710.1 Steroid CPD/CYP90A1 low borderline
Pvir03NG0001420.1 Steroid CPD/CYP90A1 low borderline
Pvir03NG0033690.1 Steroid CPD/CYP90A1 medium borderline
Pvir03NG0036700.1 Steroid CPD/CYP90A1 low borderline
Pvir03NG0036990.1 Steroid CPD/CYP90A1 medium borderline
Pvir04KG0025420.1 Steroid CPD/CYP90A1 medium borderline
Pvir04KG0028500.1 Steroid CPD/CYP90A1 medium borderline
Pvir04NG0018420.1 Steroid CPD/CYP90A1 low borderline
Pvir04NG0019320.1 Steroid CPD/CYP90A1 medium borderline
Pvir04NG0019320.2 Steroid CPD/CYP90A1 medium borderline
Pvir04NG0022260.1 Steroid CPD/CYP90A1 medium borderline
Pvir05KG0001030.1 Steroid CPD/CYP90A1 medium borderline
Pvir05KG0034300.1 Steroid CPD/CYP90A1 medium borderline
Pvir05KG0034300.3 Steroid CPD/CYP90A1 medium borderline
Pvir05KG0034320.1 Steroid CPD/CYP90A1 medium borderline
Pvir05KG0042080.1 Steroid CPD/CYP90A1 low borderline
Pvir05NG0012900.1 Steroid CPD/CYP90A1 medium borderline
Pvir05NG0041090.1 Steroid CPD/CYP90A1 low borderline
Pvir05NG0043570.1 Steroid CPD/CYP90A1 low borderline
Pvir06KG0017160.1 Steroid CPD/CYP90A1 medium borderline
Pvir06KG0023720.1 Steroid CPD/CYP90A1 medium borderline
Pvir06NG0015640.1 Steroid CPD/CYP90A1 medium borderline
Pvir06NG0022170.1 Steroid CPD/CYP90A1 medium borderline
Pvir07KG0025190.1 Steroid CPD/CYP90A1 medium borderline
Pvir07KG0027300.1 Steroid CPD/CYP90A1 low borderline
Pvir07KG0027320.1 Steroid CPD/CYP90A1 low borderline
Pvir07KG0027320.2 Steroid CPD/CYP90A1 low borderline
Pvir07KG0027320.4 Steroid CPD/CYP90A1 low borderline
Pvir07KG0027320.6 Steroid CPD/CYP90A1 low borderline
Pvir07NG0025600.1 Steroid CPD/CYP90A1 low borderline
Pvir07NG0025620.1 Steroid CPD/CYP90A1 low borderline
Pvir07NG0025630.1 Steroid CPD/CYP90A1 low borderline
Pvir08KG0012800.1 Steroid CPD/CYP90A1 medium borderline
Pvir08KG0016740.1 Steroid CPD/CYP90A1 low borderline
Pvir08NG0001660.1 Steroid CPD/CYP90A1 low borderline
Pvir08NG0001950.1 Steroid CPD/CYP90A1 medium borderline
Pvir08NG0001950.2 Steroid CPD/CYP90A1 medium borderline
Pvir08NG0010520.1 Steroid CPD/CYP90A1 medium borderline
Pvir08NG0013930.1 Steroid CPD/CYP90A1 low borderline
Pvir09KG0019000.1 Steroid CPD/CYP90A1 low borderline
Pvir09KG0030490.1 Steroid CPD/CYP90A1 low borderline
Pvir09KG0037050.1 Steroid CPD/CYP90A1 medium borderline
Pvir09KG0037050.2 Steroid CPD/CYP90A1 medium borderline
Pvir09KG0039850.1 Steroid CPD/CYP90A1 low borderline
Pvir09KG0048450.1 Steroid CPD/CYP90A1 medium borderline
Pvir09KG0053250.1 Steroid CPD/CYP90A1 low borderline
Pvir09NG0015410.1 Steroid CPD/CYP90A1 medium borderline
Pvir09NG0019150.1 Steroid CPD/CYP90A1 low borderline
Pvir09NG0029960.1 Steroid CPD/CYP90A1 low borderline