PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir08NG0026400.1 Alkaloid CNMT low borderline
Pvir09KG0001520.1 Alkaloid CNMT low borderline
Pvir09KG0002630.1 Alkaloid CNMT low borderline
Pvir09KG0002630.2 Alkaloid CNMT low borderline
Pvir09NG0001480.1 Alkaloid CNMT low borderline
Pvir09NG0002710.1 Alkaloid CNMT low borderline
Pvir09NG0038330.1 Alkaloid CNMT medium pass
Pvir09NG0059930.1 Alkaloid CNMT low borderline
Pvir09NG0059930.2 Alkaloid CNMT low borderline
Pvir01KG0000170.1 Alkaloid CODM/T6ODM medium borderline
Pvir01KG0019110.1 Alkaloid CODM/T6ODM medium borderline
Pvir01KG0019110.2 Alkaloid CODM/T6ODM medium borderline
Pvir01KG0029560.1 Alkaloid CODM/T6ODM medium borderline
Pvir01KG0040470.1 Alkaloid CODM/T6ODM medium borderline
Pvir01KG0040470.2 Alkaloid CODM/T6ODM medium borderline
Pvir01KG0040790.1 Alkaloid CODM/T6ODM medium borderline
Pvir01KG0040790.2 Alkaloid CODM/T6ODM medium borderline
Pvir01KG0044490.1 Alkaloid CODM/T6ODM medium borderline
Pvir01NG0028930.1 Alkaloid CODM/T6ODM medium borderline
Pvir01NG0028940.1 Alkaloid CODM/T6ODM medium borderline
Pvir01NG0039290.1 Alkaloid CODM/T6ODM medium borderline
Pvir01NG0039640.1 Alkaloid CODM/T6ODM medium borderline
Pvir01NG0042930.1 Alkaloid CODM/T6ODM medium borderline
Pvir02KG0028770.1 Alkaloid CODM/T6ODM medium borderline
Pvir02NG0024960.1 Alkaloid CODM/T6ODM medium borderline
Pvir02NG0024960.2 Alkaloid CODM/T6ODM medium borderline
Pvir02NG0025870.1 Alkaloid CODM/T6ODM medium borderline
Pvir02NG0025880.1 Alkaloid CODM/T6ODM medium borderline
Pvir03KG0013500.1 Alkaloid CODM/T6ODM medium borderline
Pvir03KG0019160.1 Alkaloid CODM/T6ODM medium borderline
Pvir03KG0029210.1 Alkaloid CODM/T6ODM medium borderline
Pvir03KG0039650.1 Alkaloid CODM/T6ODM medium borderline
Pvir03NG0007390.1 Alkaloid CODM/T6ODM medium borderline
Pvir03NG0012130.1 Alkaloid CODM/T6ODM medium borderline
Pvir03NG0017930.1 Alkaloid CODM/T6ODM medium borderline
Pvir03NG0024590.1 Alkaloid CODM/T6ODM medium borderline
Pvir03NG0024640.1 Alkaloid CODM/T6ODM medium borderline
Pvir03NG0026420.1 Alkaloid CODM/T6ODM medium borderline
Pvir03NG0026420.2 Alkaloid CODM/T6ODM medium borderline
Pvir03NG0040280.1 Alkaloid CODM/T6ODM medium borderline
Pvir04KG0002020.1 Alkaloid CODM/T6ODM medium borderline
Pvir04KG0002020.2 Alkaloid CODM/T6ODM medium borderline
Pvir04KG0005560.1 Alkaloid CODM/T6ODM medium borderline
Pvir04KG0005990.1 Alkaloid CODM/T6ODM medium borderline
Pvir04KG0006760.1 Alkaloid CODM/T6ODM medium borderline
Pvir04KG0006760.2 Alkaloid CODM/T6ODM medium borderline
Pvir04KG0006770.1 Alkaloid CODM/T6ODM medium borderline
Pvir04KG0009260.1 Alkaloid CODM/T6ODM medium borderline
Pvir04KG0024230.1 Alkaloid CODM/T6ODM medium borderline
Pvir04NG0001700.1 Alkaloid CODM/T6ODM medium borderline