PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir09NG0040560.1 Terpenoid BAHD low borderline
Pvir09NG0040560.2 Terpenoid BAHD low borderline
Pvir09NG0042270.1 Terpenoid BAHD medium pass
Pvir09NG0042270.2 Terpenoid BAHD medium pass
Pvir09NG0053800.1 Terpenoid BAHD medium pass
Pvir09NG0053800.2 Terpenoid BAHD medium pass
Pvir09NG0054930.1 Terpenoid BAHD medium pass
Pvir09NG0055120.1 Terpenoid BAHD low borderline
Pvir05KG0041940.1 Terpenoid CMK/IspE high pass
Pvir05KG0041940.2 Terpenoid CMK/IspE medium pass
Pvir05KG0041940.3 Terpenoid CMK/IspE high pass
Pvir05NG0012020.1 Terpenoid CMK/IspE low borderline
Pvir05NG0040960.1 Terpenoid CMK/IspE high pass
Pvir01KG0001850.1 Terpenoid CYP71 medium pass
Pvir01KG0006430.1 Terpenoid CYP71 low borderline
Pvir01KG0007690.1 Terpenoid CYP71 medium borderline
Pvir01KG0007700.1 Terpenoid CYP71 medium borderline
Pvir01KG0007700.2 Terpenoid CYP71 medium borderline
Pvir01KG0007700.3 Terpenoid CYP71 medium borderline
Pvir01KG0007710.1 Terpenoid CYP71 medium borderline
Pvir01KG0007720.1 Terpenoid CYP71 medium borderline
Pvir01KG0007770.1 Terpenoid CYP71 medium borderline
Pvir01KG0007780.1 Terpenoid CYP71 medium borderline
Pvir01KG0009650.1 Terpenoid CYP71 low borderline
Pvir01KG0009650.10 Terpenoid CYP71 low borderline
Pvir01KG0009650.11 Terpenoid CYP71 low borderline
Pvir01KG0009650.2 Terpenoid CYP71 low borderline
Pvir01KG0009650.3 Terpenoid CYP71 low borderline
Pvir01KG0009650.4 Terpenoid CYP71 low borderline
Pvir01KG0009650.5 Terpenoid CYP71 low borderline
Pvir01KG0009650.6 Terpenoid CYP71 low borderline
Pvir01KG0009650.7 Terpenoid CYP71 low borderline
Pvir01KG0009650.9 Terpenoid CYP71 low borderline
Pvir01KG0021880.1 Terpenoid CYP71 medium pass
Pvir01KG0024560.1 Terpenoid CYP71 medium borderline
Pvir01KG0025050.1 Terpenoid CYP71 medium borderline
Pvir01KG0025050.2 Terpenoid CYP71 medium borderline
Pvir01KG0025060.1 Terpenoid CYP71 medium borderline
Pvir01KG0040110.1 Terpenoid CYP71 low borderline
Pvir01KG0041890.1 Terpenoid CYP71 medium pass
Pvir01KG0041890.2 Terpenoid CYP71 medium pass
Pvir01NG0001620.1 Terpenoid CYP71 medium pass
Pvir01NG0005600.1 Terpenoid CYP71 low borderline
Pvir01NG0006770.1 Terpenoid CYP71 medium borderline
Pvir01NG0006890.1 Terpenoid CYP71 medium borderline
Pvir01NG0006900.1 Terpenoid CYP71 medium borderline
Pvir01NG0008790.1 Terpenoid CYP71 low borderline
Pvir01NG0008790.2 Terpenoid CYP71 low borderline
Pvir01NG0008790.3 Terpenoid CYP71 low borderline
Pvir01NG0008790.4 Terpenoid CYP71 low borderline