PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir04NG0024710.1 Steroid DWF4/CYP90B1 low borderline
Pvir04NG0028070.1 Steroid DWF4/CYP90B1 low borderline
Pvir04NG0028070.2 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0001010.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0002330.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0004360.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0011590.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0011590.2 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0018190.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0029300.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0029360.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0029360.2 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0029360.3 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0029370.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0029530.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0029540.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0029540.2 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0029550.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0029560.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0029570.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0029580.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0029590.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0029590.2 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0029610.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0029620.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0029650.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0042020.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0045960.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0046150.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0052930.1 Steroid DWF4/CYP90B1 low borderline
Pvir05KG0052930.2 Steroid DWF4/CYP90B1 low borderline
Pvir05NG0001030.1 Steroid DWF4/CYP90B1 low borderline
Pvir05NG0001060.1 Steroid DWF4/CYP90B1 low borderline
Pvir05NG0002410.1 Steroid DWF4/CYP90B1 low borderline
Pvir05NG0004420.1 Steroid DWF4/CYP90B1 low borderline
Pvir05NG0011590.1 Steroid DWF4/CYP90B1 low borderline
Pvir05NG0017510.1 Steroid DWF4/CYP90B1 low borderline
Pvir05NG0017510.2 Steroid DWF4/CYP90B1 low borderline
Pvir05NG0017670.1 Steroid DWF4/CYP90B1 low borderline
Pvir05NG0017670.2 Steroid DWF4/CYP90B1 low borderline
Pvir05NG0028130.1 Steroid DWF4/CYP90B1 low borderline
Pvir05NG0028170.1 Steroid DWF4/CYP90B1 low borderline
Pvir05NG0028190.1 Steroid DWF4/CYP90B1 low borderline
Pvir05NG0028190.2 Steroid DWF4/CYP90B1 low borderline
Pvir05NG0028190.3 Steroid DWF4/CYP90B1 low borderline
Pvir05NG0028190.4 Steroid DWF4/CYP90B1 low borderline
Pvir05NG0028190.5 Steroid DWF4/CYP90B1 low borderline
Pvir05NG0028190.6 Steroid DWF4/CYP90B1 low borderline
Pvir05NG0028190.7 Steroid DWF4/CYP90B1 low borderline
Pvir05NG0028200.2 Steroid DWF4/CYP90B1 low borderline