PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir05NG0044500.7 Alkaloid COR medium pass
Pvir05NG0044500.8 Alkaloid COR medium pass
Pvir07KG0004680.1 Alkaloid COR medium pass
Pvir07KG0016760.1 Alkaloid COR medium pass
Pvir07KG0016760.2 Alkaloid COR medium pass
Pvir07KG0016760.3 Alkaloid COR medium pass
Pvir07KG0016760.4 Alkaloid COR medium pass
Pvir07KG0016760.5 Alkaloid COR medium pass
Pvir07KG0016760.6 Alkaloid COR medium pass
Pvir07KG0016760.7 Alkaloid COR medium pass
Pvir07KG0016780.1 Alkaloid COR medium pass
Pvir07KG0016800.1 Alkaloid COR medium pass
Pvir07KG0016810.1 Alkaloid COR medium pass
Pvir07NG0006890.1 Alkaloid COR medium pass
Pvir07NG0014900.1 Alkaloid COR medium pass
Pvir07NG0014930.1 Alkaloid COR medium pass
Pvir07NG0014990.1 Alkaloid COR medium pass
Pvir07NG0014990.2 Alkaloid COR medium pass
Pvir07NG0015000.1 Alkaloid COR low borderline
Pvir09KG0032740.1 Alkaloid COR medium pass
Pvir09KG0032800.1 Alkaloid COR medium pass
Pvir09KG0052080.1 Alkaloid COR medium pass
Pvir09NG0031800.1 Alkaloid COR medium pass
Pvir09NG0031800.2 Alkaloid COR medium pass
Pvir09NG0031800.3 Alkaloid COR medium pass
Pvir09NG0031800.4 Alkaloid COR medium pass
Pvir09NG0036590.1 Alkaloid COR medium pass
Pvir09NG0045100.1 Alkaloid COR low borderline
Pvir09NG0051700.1 Alkaloid COR medium pass
Pvir01NG0010120.1 Alkaloid CYP719 medium borderline
Pvir01NG0010120.2 Alkaloid CYP719 medium borderline
Pvir01NG0023720.1 Alkaloid CYP719 medium borderline
Pvir05KG0034310.1 Alkaloid CYP719 medium borderline
Pvir05KG0034330.1 Alkaloid CYP719 medium borderline
Pvir06NG0016440.1 Alkaloid CYP719 medium borderline
Pvir09KG0031810.1 Alkaloid CYP719 medium borderline
Pvir09KG0031820.1 Alkaloid CYP719 medium borderline
Pvir09KG0031820.2 Alkaloid CYP719 medium borderline
Pvir09NG0020370.1 Alkaloid CYP719 medium borderline
Pvir09NG0031030.1 Alkaloid CYP719 medium borderline
Pvir09NG0031050.1 Alkaloid CYP719 medium borderline
Pvir02NG0000440.1 Alkaloid CYP80B1 medium borderline
Pvir02NG0000440.2 Alkaloid CYP80B1 medium borderline
Pvir04KG0023960.1 Alkaloid CYP80B1 low borderline
Pvir04NG0016500.1 Alkaloid CYP80B1 low borderline
Pvir04NG0019670.1 Alkaloid CYP80B1 medium borderline
Pvir04NG0019670.2 Alkaloid CYP80B1 medium borderline
Pvir04NG0019720.1 Alkaloid CYP80B1 medium borderline
Pvir04NG0019720.2 Alkaloid CYP80B1 medium borderline
Pvir07KG0008040.1 Alkaloid CYP80B1 medium borderline