PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir03NG0021490.1 Rosmarinic Acid RAS low borderline
Pvir03NG0035900.1 Rosmarinic Acid RAS medium pass
Pvir03NG0036130.1 Rosmarinic Acid RAS medium pass
Pvir03NG0036130.2 Rosmarinic Acid RAS medium pass
Pvir03NG0043240.1 Rosmarinic Acid RAS low borderline
Pvir03NG0043240.2 Rosmarinic Acid RAS low borderline
Pvir04KG0001820.1 Rosmarinic Acid RAS medium pass
Pvir04KG0001820.2 Rosmarinic Acid RAS medium pass
Pvir04KG0001820.3 Rosmarinic Acid RAS medium pass
Pvir04KG0007520.1 Rosmarinic Acid RAS medium pass
Pvir04KG0011210.1 Rosmarinic Acid RAS low borderline
Pvir04KG0011210.2 Rosmarinic Acid RAS low borderline
Pvir04KG0011210.4 Rosmarinic Acid RAS low borderline
Pvir04KG0023000.1 Rosmarinic Acid RAS medium pass
Pvir04KG0034250.1 Rosmarinic Acid RAS medium pass
Pvir04KG0034250.2 Rosmarinic Acid RAS medium pass
Pvir04NG0004340.1 Rosmarinic Acid RAS low borderline
Pvir04NG0006460.1 Rosmarinic Acid RAS medium pass
Pvir04NG0006470.1 Rosmarinic Acid RAS medium pass
Pvir04NG0010040.1 Rosmarinic Acid RAS low borderline
Pvir04NG0030820.1 Rosmarinic Acid RAS medium pass
Pvir04NG0030830.1 Rosmarinic Acid RAS medium pass
Pvir05KG0004770.1 Rosmarinic Acid RAS low borderline
Pvir05KG0008580.1 Rosmarinic Acid RAS medium pass
Pvir05KG0011040.1 Rosmarinic Acid RAS medium pass
Pvir05KG0011150.1 Rosmarinic Acid RAS medium pass
Pvir05KG0015630.1 Rosmarinic Acid RAS low borderline
Pvir05KG0015640.1 Rosmarinic Acid RAS low borderline
Pvir05KG0015680.1 Rosmarinic Acid RAS low borderline
Pvir05KG0015690.1 Rosmarinic Acid RAS low borderline
Pvir05KG0028230.1 Rosmarinic Acid RAS low borderline
Pvir05KG0028240.1 Rosmarinic Acid RAS low borderline
Pvir05KG0038060.1 Rosmarinic Acid RAS medium pass
Pvir05NG0004950.1 Rosmarinic Acid RAS low borderline
Pvir05NG0011070.1 Rosmarinic Acid RAS medium pass
Pvir05NG0027050.1 Rosmarinic Acid RAS low borderline
Pvir05NG0027060.1 Rosmarinic Acid RAS low borderline
Pvir05NG0037220.1 Rosmarinic Acid RAS medium pass
Pvir05NG0050450.1 Rosmarinic Acid RAS medium pass
Pvir06KG0006310.1 Rosmarinic Acid RAS medium pass
Pvir06KG0010580.1 Rosmarinic Acid RAS low borderline
Pvir06KG0010580.2 Rosmarinic Acid RAS low borderline
Pvir06KG0010580.3 Rosmarinic Acid RAS low borderline
Pvir06KG0010590.1 Rosmarinic Acid RAS low borderline
Pvir06KG0010590.2 Rosmarinic Acid RAS low borderline
Pvir06KG0010590.3 Rosmarinic Acid RAS low borderline
Pvir06KG0021720.1 Rosmarinic Acid RAS medium pass
Pvir06NG0010170.1 Rosmarinic Acid RAS low borderline
Pvir06NG0012540.1 Rosmarinic Acid RAS medium pass
Pvir07KG0006260.1 Rosmarinic Acid RAS low borderline