PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Pvir09NG0049180.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir09NG0049190.2 Steroid BR6OX1/CYP85A1 medium borderline
Pvir09NG0060260.6 Steroid BR6OX1/CYP85A1 low borderline
Pvir09NG0060260.7 Steroid BR6OX1/CYP85A1 low borderline
Pvir01KG0007690.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir01KG0007700.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir01KG0007700.2 Steroid BR6OX2/CYP85A2 low borderline
Pvir01KG0007700.3 Steroid BR6OX2/CYP85A2 low borderline
Pvir01KG0007710.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir01KG0007720.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir01KG0007770.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir01KG0007780.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir01KG0014390.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir01KG0032300.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir01KG0044330.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir01NG0000550.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir01NG0000550.2 Steroid BR6OX2/CYP85A2 low borderline
Pvir01NG0006770.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir01NG0006900.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir01NG0013060.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir01NG0015330.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir01NG0019740.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir01NG0031560.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir02KG0004800.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir02KG0004840.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir02KG0004880.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir02KG0004920.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir02KG0026580.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir02KG0028110.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir02KG0028610.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir02KG0034980.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir02KG0049580.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir02NG0006680.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir02NG0018400.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir02NG0022280.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir02NG0025300.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir02NG0025310.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir02NG0025760.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir02NG0032210.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir02NG0032210.2 Steroid BR6OX2/CYP85A2 low borderline
Pvir02NG0046070.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir02NG0046070.2 Steroid BR6OX2/CYP85A2 low borderline
Pvir02NG0046070.3 Steroid BR6OX2/CYP85A2 low borderline
Pvir02NG0047430.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir03KG0005800.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir03KG0005810.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir03KG0014800.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir03KG0014800.2 Steroid BR6OX2/CYP85A2 low borderline
Pvir03KG0017260.1 Steroid BR6OX2/CYP85A2 low borderline
Pvir03KG0024500.1 Steroid BR6OX2/CYP85A2 low borderline