PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir05NG0011260.1 Steroid HYD1 high pass
Pvir01KG0032900.1 Steroid ROT3/CYP90C1 medium borderline
Pvir01NG0032170.1 Steroid ROT3/CYP90C1 medium borderline
Pvir02NG0008500.1 Steroid ROT3/CYP90C1 medium borderline
Pvir03KG0011190.1 Steroid ROT3/CYP90C1 medium borderline
Pvir03KG0015680.1 Steroid ROT3/CYP90C1 medium borderline
Pvir03NG0014410.1 Steroid ROT3/CYP90C1 low borderline
Pvir05NG0003370.1 Steroid ROT3/CYP90C1 medium borderline
Pvir09KG0002110.1 Steroid ROT3/CYP90C1 medium borderline
Pvir09NG0020390.1 Steroid ROT3/CYP90C1 medium borderline
Pvir09NG0031050.1 Steroid ROT3/CYP90C1 medium borderline
Pvir09NG0049170.1 Steroid ROT3/CYP90C1 medium borderline
Pvir09NG0049190.1 Steroid ROT3/CYP90C1 medium borderline
Pvir03NG0039600.1 Steroid SMO1/SMO2 medium pass
Pvir03NG0039600.2 Steroid SMO1/SMO2 medium pass
Pvir05KG0021890.1 Steroid SMO1/SMO2 medium pass
Pvir05KG0021890.2 Steroid SMO1/SMO2 medium pass
Pvir05KG0021890.3 Steroid SMO1/SMO2 medium pass
Pvir05KG0021890.4 Steroid SMO1/SMO2 medium pass
Pvir05KG0021890.5 Steroid SMO1/SMO2 medium pass
Pvir05KG0021890.6 Steroid SMO1/SMO2 medium pass
Pvir05KG0028090.1 Steroid SMO1/SMO2 medium pass
Pvir05NG0020730.1 Steroid SMO1/SMO2 medium pass
Pvir05NG0020730.2 Steroid SMO1/SMO2 medium pass
Pvir05NG0020730.3 Steroid SMO1/SMO2 medium pass
Pvir05NG0020730.4 Steroid SMO1/SMO2 medium pass
Pvir05NG0020730.5 Steroid SMO1/SMO2 medium pass
Pvir05NG0020730.6 Steroid SMO1/SMO2 medium pass
Pvir05NG0020730.7 Steroid SMO1/SMO2 medium pass
Pvir05NG0026920.1 Steroid SMO1/SMO2 medium pass
Pvir05NG0026920.2 Steroid SMO1/SMO2 medium pass
Pvir08KG0033780.1 Steroid SMO1/SMO2 medium pass
Pvir08NG0014220.1 Steroid SMO1/SMO2 medium pass
Pvir08NG0014220.2 Steroid SMO1/SMO2 medium pass
Pvir08NG0026920.1 Steroid SMO1/SMO2 medium pass
Pvir08NG0026920.2 Steroid SMO1/SMO2 medium pass
Pvir08NG0026920.3 Steroid SMO1/SMO2 medium pass
Pvir08NG0026920.4 Steroid SMO1/SMO2 medium pass
Pvir08NG0026920.5 Steroid SMO1/SMO2 medium pass
Pvir08NG0026920.6 Steroid SMO1/SMO2 medium pass
Pvir08NG0026920.7 Steroid SMO1/SMO2 medium pass
Pvir09KG0032340.1 Steroid SMO1/SMO2 medium pass
Pvir09KG0037200.1 Steroid SMO1/SMO2 medium pass
Pvir09KG0037200.2 Steroid SMO1/SMO2 medium pass
Pvir09KG0062610.1 Steroid SMO1/SMO2 medium pass
Pvir09KG0062610.2 Steroid SMO1/SMO2 medium pass
Pvir09NG0031320.1 Steroid SMO1/SMO2 medium pass
Pvir09NG0036220.1 Steroid SMO1/SMO2 medium pass
Pvir09NG0036220.2 Steroid SMO1/SMO2 medium pass
Pvir09NG0036220.3 Steroid SMO1/SMO2 medium pass