PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir09NG0008270.2 Terpenoid CYP76 medium pass
Pvir09NG0008280.1 Terpenoid CYP76 medium pass
Pvir09NG0019360.1 Terpenoid CYP76 medium pass
Pvir09NG0019370.1 Terpenoid CYP76 medium pass
Pvir09NG0020040.1 Terpenoid CYP76 medium borderline
Pvir09NG0020060.1 Terpenoid CYP76 medium borderline
Pvir09NG0020370.1 Terpenoid CYP76 low borderline
Pvir09NG0020380.1 Terpenoid CYP76 medium pass
Pvir09NG0020390.1 Terpenoid CYP76 medium pass
Pvir09NG0020480.1 Terpenoid CYP76 medium borderline
Pvir09NG0025580.1 Terpenoid CYP76 medium borderline
Pvir09NG0027810.1 Terpenoid CYP76 medium pass
Pvir09NG0030680.1 Terpenoid CYP76 medium pass
Pvir09NG0031030.1 Terpenoid CYP76 medium pass
Pvir09NG0031050.1 Terpenoid CYP76 medium pass
Pvir09NG0031330.1 Terpenoid CYP76 medium borderline
Pvir09NG0034100.1 Terpenoid CYP76 medium pass
Pvir09NG0037540.1 Terpenoid CYP76 low borderline
Pvir09NG0038930.1 Terpenoid CYP76 low borderline
Pvir09NG0038930.2 Terpenoid CYP76 low borderline
Pvir09NG0038930.3 Terpenoid CYP76 low borderline
Pvir09NG0038930.4 Terpenoid CYP76 low borderline
Pvir09NG0039310.1 Terpenoid CYP76 medium pass
Pvir09NG0042050.1 Terpenoid CYP76 medium borderline
Pvir09NG0042050.2 Terpenoid CYP76 medium borderline
Pvir09NG0042470.1 Terpenoid CYP76 medium pass
Pvir09NG0042480.1 Terpenoid CYP76 medium pass
Pvir09NG0042490.1 Terpenoid CYP76 medium pass
Pvir09NG0042500.1 Terpenoid CYP76 medium borderline
Pvir09NG0042510.1 Terpenoid CYP76 medium borderline
Pvir09NG0042510.2 Terpenoid CYP76 medium borderline
Pvir09NG0050930.1 Terpenoid CYP76 medium borderline
Pvir09NG0052000.1 Terpenoid CYP76 low borderline
Pvir09NG0052000.2 Terpenoid CYP76 low borderline
Pvir09NG0060040.1 Terpenoid CYP76 medium pass
Pvir09NG0060040.2 Terpenoid CYP76 medium pass
Pvirscaffold_1990002330.1 Terpenoid CYP76 medium borderline
Pvir05KG0010910.1 Terpenoid DXR high pass
Pvir05KG0010910.2 Terpenoid DXR high pass
Pvir05KG0010910.3 Terpenoid DXR high pass
Pvir05NG0010820.1 Terpenoid DXR high pass
Pvir05NG0010820.2 Terpenoid DXR high pass
Pvir07KG0024990.1 Terpenoid DXR low borderline
Pvir02KG0008040.1 Terpenoid DXS medium pass
Pvir02KG0008040.2 Terpenoid DXS medium pass
Pvir02NG0006890.1 Terpenoid DXS medium pass
Pvir02NG0006890.2 Terpenoid DXS medium pass
Pvir02NG0006890.3 Terpenoid DXS medium pass
Pvir03KG0030220.1 Terpenoid DXS medium pass
Pvir03NG0028350.1 Terpenoid DXS medium pass