PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Pvir01KG0015600.1 Alkaloid 7DLGT low borderline
Pvir01KG0015620.1 Alkaloid 7DLGT medium pass
Pvir01KG0025190.1 Alkaloid 7DLGT medium pass
Pvir01KG0025570.1 Alkaloid 7DLGT medium pass
Pvir01KG0025580.1 Alkaloid 7DLGT medium pass
Pvir01KG0029870.1 Alkaloid 7DLGT low borderline
Pvir01KG0039790.1 Alkaloid 7DLGT medium pass
Pvir01KG0039800.1 Alkaloid 7DLGT high pass
Pvir01KG0039810.1 Alkaloid 7DLGT medium pass
Pvir01NG0007020.1 Alkaloid 7DLGT medium pass
Pvir01NG0007030.1 Alkaloid 7DLGT low borderline
Pvir01NG0008970.1 Alkaloid 7DLGT medium pass
Pvir01NG0009000.1 Alkaloid 7DLGT medium pass
Pvir01NG0009020.1 Alkaloid 7DLGT medium pass
Pvir01NG0009040.1 Alkaloid 7DLGT medium pass
Pvir01NG0010360.1 Alkaloid 7DLGT medium pass
Pvir01NG0011490.1 Alkaloid 7DLGT high pass
Pvir01NG0011500.1 Alkaloid 7DLGT medium pass
Pvir01NG0011510.1 Alkaloid 7DLGT medium pass
Pvir01NG0011530.1 Alkaloid 7DLGT medium pass
Pvir01NG0011600.1 Alkaloid 7DLGT medium pass
Pvir01NG0012530.1 Alkaloid 7DLGT medium pass
Pvir01NG0012540.1 Alkaloid 7DLGT medium pass
Pvir01NG0014070.1 Alkaloid 7DLGT medium pass
Pvir01NG0014090.1 Alkaloid 7DLGT medium pass
Pvir01NG0014100.1 Alkaloid 7DLGT medium pass
Pvir01NG0024610.1 Alkaloid 7DLGT medium pass
Pvir01NG0024970.1 Alkaloid 7DLGT medium pass
Pvir01NG0024970.2 Alkaloid 7DLGT medium pass
Pvir01NG0029200.1 Alkaloid 7DLGT medium pass
Pvir01NG0038540.1 Alkaloid 7DLGT medium pass
Pvir01NG0038570.1 Alkaloid 7DLGT medium pass
Pvir01NG0038580.1 Alkaloid 7DLGT medium pass
Pvir02KG0004170.1 Alkaloid 7DLGT low borderline
Pvir02KG0007790.1 Alkaloid 7DLGT medium pass
Pvir02KG0008980.1 Alkaloid 7DLGT low borderline
Pvir02KG0008990.1 Alkaloid 7DLGT low borderline
Pvir02KG0011090.1 Alkaloid 7DLGT medium pass
Pvir02KG0011090.2 Alkaloid 7DLGT medium pass
Pvir02KG0011100.1 Alkaloid 7DLGT medium pass
Pvir02KG0011110.1 Alkaloid 7DLGT medium pass
Pvir02KG0011120.1 Alkaloid 7DLGT medium pass
Pvir02KG0011130.1 Alkaloid 7DLGT medium pass
Pvir02KG0013110.1 Alkaloid 7DLGT low borderline
Pvir02KG0013130.1 Alkaloid 7DLGT low borderline
Pvir02KG0013240.1 Alkaloid 7DLGT low borderline
Pvir02KG0013810.1 Alkaloid 7DLGT low borderline
Pvir02KG0020060.1 Alkaloid 7DLGT medium pass
Pvir02KG0022490.1 Alkaloid 7DLGT medium pass
Pvir02KG0022570.1 Alkaloid 7DLGT low borderline