PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status Best Target
Pvir06NG0011950.1 Phenylpropanoid 4CL medium pass 4CL__00006__sp_P17814_4CL1_ORYSJ
Pvir06NG0011950.2 Phenylpropanoid 4CL medium pass 4CL__00006__sp_P17814_4CL1_ORYSJ
Pvir06NG0011950.3 Phenylpropanoid 4CL medium pass 4CL__00006__sp_P17814_4CL1_ORYSJ
Pvir06NG0014820.1 Phenylpropanoid 4CL medium pass 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
Pvir06NG0020610.1 Phenylpropanoid 4CL medium pass 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ
Pvir07KG0008100.1 Phenylpropanoid 4CL medium pass 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ
Pvir07KG0008100.2 Phenylpropanoid 4CL medium pass 4CL__00009__sp_Q67W82_4CL4_ORYSJ
Pvir07KG0008870.1 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pvir07KG0013330.1 Phenylpropanoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Pvir07KG0013330.2 Phenylpropanoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Pvir07KG0035870.1 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pvir07KG0036590.1 Phenylpropanoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pvir07KG0036590.2 Phenylpropanoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pvir07NG0008580.1 Phenylpropanoid 4CL medium pass 4CL__00009__sp_Q67W82_4CL4_ORYSJ
Pvir07NG0008580.2 Phenylpropanoid 4CL medium pass 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ
Pvir07NG0011610.1 Phenylpropanoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Pvir07NG0011610.2 Phenylpropanoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Pvir07NG0011610.3 Phenylpropanoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Pvir07NG0034220.1 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pvir07NG0034240.1 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pvir07NG0035090.1 Phenylpropanoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pvir07NG0035090.2 Phenylpropanoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pvir08KG0003290.1 Phenylpropanoid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Pvir08KG0006010.1 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pvir08KG0006300.1 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pvir08KG0012990.1 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pvir08KG0012990.2 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pvir08KG0012990.3 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pvir08KG0012990.4 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pvir08KG0013310.1 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pvir08KG0022560.1 Phenylpropanoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Pvir08KG0022560.2 Phenylpropanoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Pvir08KG0022560.3 Phenylpropanoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Pvir08KG0022560.4 Phenylpropanoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Pvir08KG0022560.5 Phenylpropanoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Pvir08KG0022560.6 Phenylpropanoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Pvir08NG0004160.1 Phenylpropanoid 4CL low borderline 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pvir08NG0011170.1 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pvir08NG0018670.1 Phenylpropanoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Pvir09KG0001390.1 Phenylpropanoid 4CL low borderline 4CL__00004__sp_O24146_4CL2_TOBAC
Pvir09KG0001390.2 Phenylpropanoid 4CL low borderline 4CL__00004__sp_O24146_4CL2_TOBAC
Pvir09KG0019380.1 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pvir09KG0019390.1 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pvir09KG0019580.1 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pvir09KG0033830.1 Phenylpropanoid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pvir09KG0046980.1 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pvir09KG0046980.2 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pvir09KG0046990.1 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pvir09KG0058700.1 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pvir09KG0058700.2 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH