PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir01NG0028600.7 Flavonoid PAL high pass
Pvir01NG0028600.8 Flavonoid PAL high pass
Pvir01NG0028600.9 Flavonoid PAL high pass
Pvir01NG0028610.1 Flavonoid PAL high pass
Pvir01NG0028620.1 Flavonoid PAL high pass
Pvir01NG0028620.2 Flavonoid PAL high pass
Pvir01NG0029370.1 Flavonoid PAL medium pass
Pvir02NG0010370.1 Flavonoid PAL low borderline
Pvir03NG0011520.2 Flavonoid PAL low borderline
Pvir04KG0021310.1 Flavonoid PAL high pass
Pvir07KG0022960.1 Flavonoid PAL high pass
Pvir07KG0022980.1 Flavonoid PAL high pass
Pvir07NG0020820.1 Flavonoid PAL high pass
Pvir07NG0020820.2 Flavonoid PAL high pass
Pvir07NG0020820.3 Flavonoid PAL high pass
Pvir07NG0020820.4 Flavonoid PAL high pass
Pvir07NG0020840.1 Flavonoid PAL high pass
Pvir01KG0004170.1 Flavonoid UFGT medium pass
Pvir01KG0007020.1 Flavonoid UFGT high pass
Pvir01KG0007880.1 Flavonoid UFGT medium pass
Pvir01KG0007900.1 Flavonoid UFGT medium pass
Pvir01KG0009800.1 Flavonoid UFGT high pass
Pvir01KG0009820.1 Flavonoid UFGT high pass
Pvir01KG0009850.1 Flavonoid UFGT medium pass
Pvir01KG0010190.1 Flavonoid UFGT low borderline
Pvir01KG0011540.1 Flavonoid UFGT high pass
Pvir01KG0012860.1 Flavonoid UFGT high pass
Pvir01KG0012870.1 Flavonoid UFGT high pass
Pvir01KG0012890.1 Flavonoid UFGT medium pass
Pvir01KG0012900.1 Flavonoid UFGT medium pass
Pvir01KG0012910.1 Flavonoid UFGT medium pass
Pvir01KG0013870.1 Flavonoid UFGT high pass
Pvir01KG0015600.1 Flavonoid UFGT medium pass
Pvir01KG0015620.1 Flavonoid UFGT medium pass
Pvir01KG0019320.1 Flavonoid UFGT low borderline
Pvir01KG0025190.1 Flavonoid UFGT high pass
Pvir01KG0025570.1 Flavonoid UFGT medium pass
Pvir01KG0025580.1 Flavonoid UFGT high pass
Pvir01KG0029870.1 Flavonoid UFGT medium pass
Pvir01KG0039790.1 Flavonoid UFGT high pass
Pvir01KG0039800.1 Flavonoid UFGT high pass
Pvir01KG0039810.1 Flavonoid UFGT medium pass
Pvir01NG0007020.1 Flavonoid UFGT medium pass
Pvir01NG0007030.1 Flavonoid UFGT high pass
Pvir01NG0008970.1 Flavonoid UFGT high pass
Pvir01NG0009000.1 Flavonoid UFGT high pass
Pvir01NG0009020.1 Flavonoid UFGT high pass
Pvir01NG0009040.1 Flavonoid UFGT low borderline
Pvir01NG0010360.1 Flavonoid UFGT medium pass
Pvir01NG0011490.1 Flavonoid UFGT high pass