PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir05NG0027660.1 Flavonoid UFGT medium pass
Pvir05NG0028970.1 Flavonoid UFGT high pass
Pvir05NG0032160.1 Flavonoid UFGT medium pass
Pvir05NG0033030.1 Flavonoid UFGT medium pass
Pvir05NG0035800.1 Flavonoid UFGT high pass
Pvir05NG0035810.1 Flavonoid UFGT high pass
Pvir05NG0035830.1 Flavonoid UFGT low borderline
Pvir05NG0035860.1 Flavonoid UFGT high pass
Pvir05NG0035870.1 Flavonoid UFGT medium pass
Pvir05NG0035890.1 Flavonoid UFGT high pass
Pvir05NG0035910.1 Flavonoid UFGT high pass
Pvir05NG0035920.1 Flavonoid UFGT high pass
Pvir05NG0035930.1 Flavonoid UFGT high pass
Pvir05NG0041170.1 Flavonoid UFGT medium pass
Pvir05NG0041180.1 Flavonoid UFGT medium pass
Pvir05NG0045860.1 Flavonoid UFGT high pass
Pvir05NG0045880.1 Flavonoid UFGT medium pass
Pvir05NG0046050.1 Flavonoid UFGT low borderline
Pvir05NG0046050.2 Flavonoid UFGT low borderline
Pvir06KG0004830.1 Flavonoid UFGT medium pass
Pvir06KG0007220.1 Flavonoid UFGT high pass
Pvir06KG0007260.1 Flavonoid UFGT high pass
Pvir06KG0009580.1 Flavonoid UFGT medium pass
Pvir06KG0012020.1 Flavonoid UFGT low borderline
Pvir06KG0013650.1 Flavonoid UFGT high pass
Pvir06KG0016900.1 Flavonoid UFGT medium pass
Pvir06KG0016900.2 Flavonoid UFGT medium pass
Pvir06KG0016900.3 Flavonoid UFGT medium pass
Pvir06KG0016900.4 Flavonoid UFGT high pass
Pvir06KG0019230.1 Flavonoid UFGT high pass
Pvir06KG0019270.1 Flavonoid UFGT low borderline
Pvir06KG0022480.1 Flavonoid UFGT medium pass
Pvir06KG0024760.1 Flavonoid UFGT high pass
Pvir06NG0000150.1 Flavonoid UFGT medium pass
Pvir06NG0004960.1 Flavonoid UFGT medium pass
Pvir06NG0006650.1 Flavonoid UFGT medium pass
Pvir06NG0014410.1 Flavonoid UFGT medium pass
Pvir06NG0015470.1 Flavonoid UFGT high pass
Pvir06NG0015470.2 Flavonoid UFGT high pass
Pvir06NG0015470.3 Flavonoid UFGT high pass
Pvir06NG0015470.4 Flavonoid UFGT high pass
Pvir06NG0015470.5 Flavonoid UFGT high pass
Pvir06NG0015470.6 Flavonoid UFGT high pass
Pvir06NG0015480.1 Flavonoid UFGT high pass
Pvir06NG0021000.1 Flavonoid UFGT medium pass
Pvir06NG0023320.1 Flavonoid UFGT high pass
Pvir06NG0023330.1 Flavonoid UFGT high pass
Pvir07KG0006880.1 Flavonoid UFGT medium pass
Pvir07KG0006890.1 Flavonoid UFGT medium pass
Pvir07KG0006950.1 Flavonoid UFGT medium pass