PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Pvir02NG0043060.5 Flavonoid ANR medium borderline
Pvir04KG0007430.1 Flavonoid ANR low borderline
Pvir04KG0007430.2 Flavonoid ANR medium borderline
Pvir04KG0027170.1 Flavonoid ANR medium borderline
Pvir04KG0027190.1 Flavonoid ANR medium borderline
Pvir04KG0029280.1 Flavonoid ANR medium borderline
Pvir04KG0029320.1 Flavonoid ANR medium pass
Pvir04KG0031920.1 Flavonoid ANR medium borderline
Pvir04KG0031920.2 Flavonoid ANR medium borderline
Pvir04NG0023800.1 Flavonoid ANR medium borderline
Pvir04NG0023800.2 Flavonoid ANR medium borderline
Pvir04NG0023830.1 Flavonoid ANR medium borderline
Pvir04NG0023830.2 Flavonoid ANR medium borderline
Pvir04NG0023830.3 Flavonoid ANR medium borderline
Pvir04NG0025640.1 Flavonoid ANR medium borderline
Pvir04NG0025640.2 Flavonoid ANR medium borderline
Pvir04NG0025650.1 Flavonoid ANR medium pass
Pvir04NG0025650.2 Flavonoid ANR medium pass
Pvir04NG0028200.1 Flavonoid ANR medium borderline
Pvir05KG0020700.1 Flavonoid ANR medium borderline
Pvir05KG0021270.1 Flavonoid ANR medium borderline
Pvir05KG0021270.3 Flavonoid ANR medium borderline
Pvir05KG0021270.4 Flavonoid ANR medium borderline
Pvir05KG0021270.6 Flavonoid ANR medium borderline
Pvir05KG0029860.1 Flavonoid ANR medium borderline
Pvir05KG0030120.1 Flavonoid ANR low borderline
Pvir05KG0043810.1 Flavonoid ANR medium borderline
Pvir05KG0043820.1 Flavonoid ANR medium borderline
Pvir05KG0043830.1 Flavonoid ANR medium borderline
Pvir05KG0043850.1 Flavonoid ANR medium borderline
Pvir05NG0018110.1 Flavonoid ANR medium borderline
Pvir05NG0020110.1 Flavonoid ANR medium borderline
Pvir05NG0020110.2 Flavonoid ANR medium borderline
Pvir05NG0028800.1 Flavonoid ANR medium borderline
Pvir05NG0028990.1 Flavonoid ANR low borderline
Pvir05NG0028990.2 Flavonoid ANR low borderline
Pvir05NG0042990.1 Flavonoid ANR medium borderline
Pvir05NG0043020.1 Flavonoid ANR medium borderline
Pvir06KG0013810.1 Flavonoid ANR medium borderline
Pvir06KG0021620.1 Flavonoid ANR medium borderline
Pvir06KG0021620.2 Flavonoid ANR medium borderline
Pvir06KG0021620.3 Flavonoid ANR medium borderline
Pvir06NG0014590.1 Flavonoid ANR medium borderline
Pvir06NG0020170.3 Flavonoid ANR medium borderline
Pvir06NG0020170.4 Flavonoid ANR medium borderline
Pvir07KG0032100.1 Flavonoid ANR medium borderline
Pvir07KG0032110.1 Flavonoid ANR medium borderline
Pvir07KG0032110.2 Flavonoid ANR medium borderline
Pvir07KG0032110.3 Flavonoid ANR medium borderline
Pvir07KG0032120.1 Flavonoid ANR medium borderline