PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir04NG0006820.1 Alkaloid SLS medium borderline
Pvir04NG0006820.2 Alkaloid SLS medium borderline
Pvir04NG0022260.1 Alkaloid SLS medium borderline
Pvir05KG0005080.1 Alkaloid SLS medium borderline
Pvir05KG0005080.2 Alkaloid SLS medium borderline
Pvir05KG0018100.1 Alkaloid SLS medium pass
Pvir05KG0029300.1 Alkaloid SLS medium borderline
Pvir05KG0029310.1 Alkaloid SLS medium borderline
Pvir05KG0029310.2 Alkaloid SLS medium borderline
Pvir05KG0029320.1 Alkaloid SLS medium borderline
Pvir05KG0029360.1 Alkaloid SLS medium borderline
Pvir05KG0029360.2 Alkaloid SLS medium borderline
Pvir05KG0029360.3 Alkaloid SLS medium borderline
Pvir05KG0029370.1 Alkaloid SLS medium borderline
Pvir05KG0029530.1 Alkaloid SLS medium borderline
Pvir05KG0029540.1 Alkaloid SLS medium borderline
Pvir05KG0029540.2 Alkaloid SLS medium borderline
Pvir05KG0029550.1 Alkaloid SLS medium borderline
Pvir05KG0029560.1 Alkaloid SLS medium borderline
Pvir05KG0029570.1 Alkaloid SLS medium borderline
Pvir05KG0029580.1 Alkaloid SLS medium borderline
Pvir05KG0029590.1 Alkaloid SLS medium borderline
Pvir05KG0029590.2 Alkaloid SLS medium borderline
Pvir05KG0029610.1 Alkaloid SLS medium borderline
Pvir05KG0029620.1 Alkaloid SLS medium borderline
Pvir05KG0029650.1 Alkaloid SLS medium borderline
Pvir05NG0005340.1 Alkaloid SLS medium borderline
Pvir05NG0017510.1 Alkaloid SLS medium borderline
Pvir05NG0017510.2 Alkaloid SLS medium borderline
Pvir05NG0017670.1 Alkaloid SLS medium borderline
Pvir05NG0017670.2 Alkaloid SLS medium borderline
Pvir05NG0028130.1 Alkaloid SLS medium borderline
Pvir05NG0028140.1 Alkaloid SLS medium borderline
Pvir05NG0028170.1 Alkaloid SLS medium borderline
Pvir05NG0028180.1 Alkaloid SLS medium borderline
Pvir05NG0028190.1 Alkaloid SLS medium borderline
Pvir05NG0028190.2 Alkaloid SLS medium borderline
Pvir05NG0028190.3 Alkaloid SLS medium borderline
Pvir05NG0028190.6 Alkaloid SLS medium borderline
Pvir05NG0028190.7 Alkaloid SLS medium borderline
Pvir05NG0028200.1 Alkaloid SLS medium borderline
Pvir05NG0028210.1 Alkaloid SLS medium borderline
Pvir05NG0028210.2 Alkaloid SLS medium borderline
Pvir05NG0028210.3 Alkaloid SLS medium borderline
Pvir05NG0028240.1 Alkaloid SLS medium borderline
Pvir05NG0028250.1 Alkaloid SLS medium borderline
Pvir05NG0028270.1 Alkaloid SLS low borderline
Pvir05NG0028280.1 Alkaloid SLS medium borderline
Pvir05NG0028290.1 Alkaloid SLS medium borderline
Pvir05NG0028310.1 Alkaloid SLS medium borderline