PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Pvir02NG0018400.1 Alkaloid T3O medium borderline
Pvir02NG0018430.1 Alkaloid T3O medium borderline
Pvir02NG0018430.2 Alkaloid T3O medium borderline
Pvir02NG0020580.1 Alkaloid T3O medium borderline
Pvir02NG0020800.1 Alkaloid T3O medium borderline
Pvir02NG0022280.1 Alkaloid T3O medium borderline
Pvir02NG0025280.1 Alkaloid T3O medium borderline
Pvir02NG0025290.1 Alkaloid T3O medium borderline
Pvir02NG0025290.2 Alkaloid T3O medium borderline
Pvir02NG0025300.1 Alkaloid T3O medium borderline
Pvir02NG0025310.1 Alkaloid T3O medium borderline
Pvir02NG0025760.1 Alkaloid T3O medium borderline
Pvir02NG0026380.1 Alkaloid T3O medium pass
Pvir02NG0032350.1 Alkaloid T3O medium borderline
Pvir02NG0032350.2 Alkaloid T3O medium borderline
Pvir02NG0038050.1 Alkaloid T3O medium pass
Pvir02NG0038090.1 Alkaloid T3O medium pass
Pvir02NG0038100.1 Alkaloid T3O medium pass
Pvir02NG0040480.1 Alkaloid T3O medium pass
Pvir02NG0043210.1 Alkaloid T3O medium borderline
Pvir02NG0047430.1 Alkaloid T3O medium borderline
Pvir03KG0000990.1 Alkaloid T3O medium pass
Pvir03KG0001010.1 Alkaloid T3O medium borderline
Pvir03KG0002120.1 Alkaloid T3O low borderline
Pvir03KG0002530.1 Alkaloid T3O medium pass
Pvir03KG0005800.1 Alkaloid T3O medium borderline
Pvir03KG0005810.1 Alkaloid T3O medium borderline
Pvir03KG0011200.1 Alkaloid T3O medium pass
Pvir03KG0014800.1 Alkaloid T3O medium pass
Pvir03KG0014800.2 Alkaloid T3O medium pass
Pvir03KG0015680.1 Alkaloid T3O medium pass
Pvir03KG0015870.1 Alkaloid T3O medium pass
Pvir03KG0015870.2 Alkaloid T3O medium pass
Pvir03KG0015870.3 Alkaloid T3O medium pass
Pvir03KG0017260.1 Alkaloid T3O medium pass
Pvir03KG0022790.1 Alkaloid T3O medium borderline
Pvir03KG0022790.2 Alkaloid T3O medium borderline
Pvir03KG0024500.1 Alkaloid T3O medium borderline
Pvir03KG0024500.2 Alkaloid T3O medium borderline
Pvir03KG0027760.1 Alkaloid T3O low borderline
Pvir03KG0029130.1 Alkaloid T3O medium borderline
Pvir03KG0036970.1 Alkaloid T3O medium borderline
Pvir03KG0037840.1 Alkaloid T3O medium borderline
Pvir03KG0047230.1 Alkaloid T3O medium borderline
Pvir03KG0047240.1 Alkaloid T3O medium borderline
Pvir03KG0048360.1 Alkaloid T3O medium borderline
Pvir03KG0052010.1 Alkaloid T3O medium borderline
Pvir03KG0052040.1 Alkaloid T3O medium borderline
Pvir03NG0000580.1 Alkaloid T3O medium pass
Pvir03NG0001420.1 Alkaloid T3O low borderline