PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Pvir09NG0047070.1 Alkaloid TRI/TRII medium pass
Pvir09NG0049300.1 Alkaloid TRI/TRII medium pass
Pvir09NG0049300.2 Alkaloid TRI/TRII medium pass
Pvir09NG0049300.3 Alkaloid TRI/TRII medium pass
Pvir01KG0023080.1 Alkaloid TYDC_DDC low borderline
Pvir03KG0008120.1 Alkaloid TYDC_DDC medium borderline
Pvir03KG0023220.1 Alkaloid TYDC_DDC medium borderline
Pvir03KG0052240.1 Alkaloid TYDC_DDC medium borderline
Pvir04NG0009880.1 Alkaloid TYDC_DDC low borderline
Pvir05KG0039680.1 Alkaloid TYDC_DDC medium borderline
Pvir05KG0053930.1 Alkaloid TYDC_DDC low borderline
Pvir05NG0038910.1 Alkaloid TYDC_DDC medium borderline
Pvir06KG0004050.1 Alkaloid TYDC_DDC medium borderline
Pvir06KG0004060.1 Alkaloid TYDC_DDC medium borderline
Pvir06NG0004110.1 Alkaloid TYDC_DDC medium borderline
Pvir06NG0004130.1 Alkaloid TYDC_DDC medium borderline
Pvir06NG0004160.1 Alkaloid TYDC_DDC medium borderline
Pvir08KG0021050.1 Alkaloid TYDC_DDC medium borderline
Pvir08KG0030510.1 Alkaloid TYDC_DDC medium borderline
Pvir08NG0023550.1 Alkaloid TYDC_DDC medium borderline
Pvir09KG0028340.1 Alkaloid TYDC_DDC medium borderline
Pvir09KG0056260.1 Alkaloid TYDC_DDC medium borderline
Pvir09NG0026580.1 Alkaloid TYDC_DDC medium borderline
Pvir09NG0055750.1 Alkaloid TYDC_DDC medium borderline
Pvir03NG0014390.1 Alkaloid XMT_MXMT_DXMT medium borderline
Pvir04KG0009880.1 Alkaloid XMT_MXMT_DXMT medium borderline
Pvir06KG0001490.1 Alkaloid XMT_MXMT_DXMT medium borderline
Pvir06KG0001500.1 Alkaloid XMT_MXMT_DXMT medium borderline
Pvir06KG0002900.1 Alkaloid XMT_MXMT_DXMT medium borderline
Pvir06KG0009450.1 Alkaloid XMT_MXMT_DXMT medium borderline
Pvir06KG0009450.2 Alkaloid XMT_MXMT_DXMT medium borderline
Pvir06NG0008870.1 Alkaloid XMT_MXMT_DXMT medium borderline
Pvir06NG0008870.2 Alkaloid XMT_MXMT_DXMT medium borderline
Pvir07NG0033340.1 Alkaloid XMT_MXMT_DXMT medium borderline