PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir03NG0048100.9 Steroid CAS medium pass
Pvir04KG0004440.1 Steroid CAS medium pass
Pvir04KG0004510.1 Steroid CAS medium pass
Pvir04KG0004510.2 Steroid CAS medium pass
Pvir04KG0004530.1 Steroid CAS medium pass
Pvir04KG0018030.1 Steroid CAS medium pass
Pvir04KG0018040.1 Steroid CAS medium pass
Pvir04KG0018040.2 Steroid CAS medium pass
Pvir04KG0018070.1 Steroid CAS medium pass
Pvir04NG0003880.1 Steroid CAS medium pass
Pvir04NG0003880.2 Steroid CAS medium pass
Pvir04NG0003890.1 Steroid CAS medium pass
Pvir04NG0010750.1 Steroid CAS low borderline
Pvir04NG0012040.1 Steroid CAS medium pass
Pvir04NG0012040.2 Steroid CAS medium pass
Pvir04NG0016180.1 Steroid CAS medium pass
Pvir04NG0016180.2 Steroid CAS medium pass
Pvir04NG0016180.3 Steroid CAS medium pass
Pvir04NG0016180.4 Steroid CAS medium pass
Pvir04NG0016210.1 Steroid CAS medium pass
Pvir05KG0011620.1 Steroid CAS medium pass
Pvir05KG0042900.1 Steroid CAS medium pass
Pvir05NG0011620.1 Steroid CAS medium pass
Pvir05NG0011620.2 Steroid CAS medium pass
Pvir05NG0011620.3 Steroid CAS medium pass
Pvir05NG0041820.1 Steroid CAS medium pass
Pvir05NG0046080.1 Steroid CAS low borderline
Pvir06KG0003880.1 Steroid CAS low borderline
Pvir06KG0003900.1 Steroid CAS low borderline
Pvir06KG0006300.1 Steroid CAS low borderline
Pvir06KG0009260.1 Steroid CAS low borderline
Pvir06KG0009260.2 Steroid CAS low borderline
Pvir06KG0009260.3 Steroid CAS low borderline
Pvir06KG0009260.4 Steroid CAS low borderline
Pvir06KG0009260.5 Steroid CAS low borderline
Pvir06KG0010220.1 Steroid CAS medium pass
Pvir06KG0018570.1 Steroid CAS medium pass
Pvir06NG0003910.1 Steroid CAS low borderline
Pvir06NG0003910.2 Steroid CAS low borderline
Pvir06NG0003980.1 Steroid CAS low borderline
Pvir06NG0006620.1 Steroid CAS low borderline
Pvir06NG0009660.1 Steroid CAS medium pass
Pvir06NG0031380.1 Steroid CAS medium pass
Pvir06NG0031380.2 Steroid CAS medium pass
Pvir07KG0004630.1 Steroid CAS medium pass
Pvir07KG0004940.1 Steroid CAS medium pass
Pvir07KG0008600.1 Steroid CAS medium pass
Pvir07KG0008610.1 Steroid CAS medium pass
Pvir07KG0008620.1 Steroid CAS medium pass
Pvir07KG0008640.1 Steroid CAS medium pass