PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir07NG0006480.1 Alkaloid 7DLGT low borderline
Pvir07NG0008880.1 Alkaloid 7DLGT low borderline
Pvir07NG0015400.1 Alkaloid 7DLGT medium pass
Pvir07NG0015410.1 Alkaloid 7DLGT medium pass
Pvir07NG0017850.1 Alkaloid 7DLGT medium pass
Pvir07NG0019890.1 Alkaloid 7DLGT low borderline
Pvir07NG0021620.1 Alkaloid 7DLGT low borderline
Pvir07NG0021630.1 Alkaloid 7DLGT medium pass
Pvir07NG0021760.1 Alkaloid 7DLGT low borderline
Pvir07NG0024150.1 Alkaloid 7DLGT low borderline
Pvir07NG0024160.1 Alkaloid 7DLGT medium pass
Pvir07NG0024170.1 Alkaloid 7DLGT low borderline
Pvir07NG0024200.1 Alkaloid 7DLGT medium pass
Pvir07NG0024210.1 Alkaloid 7DLGT medium pass
Pvir07NG0024670.1 Alkaloid 7DLGT medium pass
Pvir07NG0032040.1 Alkaloid 7DLGT low borderline
Pvir07NG0032050.1 Alkaloid 7DLGT low borderline
Pvir08KG0003180.1 Alkaloid 7DLGT medium pass
Pvir08KG0003190.1 Alkaloid 7DLGT low borderline
Pvir08KG0005670.1 Alkaloid 7DLGT medium pass
Pvir08KG0005990.1 Alkaloid 7DLGT low borderline
Pvir08KG0006280.1 Alkaloid 7DLGT low borderline
Pvir08KG0008930.1 Alkaloid 7DLGT high pass
Pvir08KG0010270.1 Alkaloid 7DLGT low borderline
Pvir08KG0010340.1 Alkaloid 7DLGT low borderline
Pvir08KG0012500.1 Alkaloid 7DLGT low borderline
Pvir08KG0012520.1 Alkaloid 7DLGT medium pass
Pvir08KG0012570.1 Alkaloid 7DLGT low borderline
Pvir08KG0016280.1 Alkaloid 7DLGT low borderline
Pvir08KG0018920.1 Alkaloid 7DLGT medium pass
Pvir08KG0020260.1 Alkaloid 7DLGT low borderline
Pvir08KG0020290.1 Alkaloid 7DLGT medium pass
Pvir08KG0020320.1 Alkaloid 7DLGT medium pass
Pvir08KG0020340.1 Alkaloid 7DLGT medium pass
Pvir08KG0020360.1 Alkaloid 7DLGT medium pass
Pvir08KG0020360.2 Alkaloid 7DLGT medium pass
Pvir08KG0020370.1 Alkaloid 7DLGT medium pass
Pvir08KG0020390.1 Alkaloid 7DLGT medium pass
Pvir08KG0020410.1 Alkaloid 7DLGT low borderline
Pvir08KG0020440.1 Alkaloid 7DLGT medium pass
Pvir08KG0020450.1 Alkaloid 7DLGT medium pass
Pvir08KG0021150.1 Alkaloid 7DLGT medium pass
Pvir08KG0022540.1 Alkaloid 7DLGT medium pass
Pvir08KG0024990.1 Alkaloid 7DLGT low borderline
Pvir08KG0026180.1 Alkaloid 7DLGT medium pass
Pvir08KG0026190.1 Alkaloid 7DLGT medium pass
Pvir08KG0026200.1 Alkaloid 7DLGT medium pass
Pvir08KG0033970.1 Alkaloid 7DLGT medium pass
Pvir08NG0001300.1 Alkaloid 7DLGT medium pass
Pvir08NG0002000.1 Alkaloid 7DLGT medium pass