PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

962
Candidate Protein Records
683
Pathway-Level Records
1791
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Psem3859390073750 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4036980097200 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4081430107630 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4104810113210 Phenylpropanoid C3'H/CYP98A medium pass
Psem4109070115530 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4140880119370 Phenylpropanoid C3'H/CYP98A low borderline
Psem4174680121690 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4194570123970 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4194840124020 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4253270132470 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4258290133310 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4272920136610 Phenylpropanoid C3'H/CYP98A low borderline
Psem4273850136830 Phenylpropanoid C3'H/CYP98A low borderline
Psem4277360137360 Phenylpropanoid C3'H/CYP98A low borderline
Psem4290260140470 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4290260140490 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4292040141080 Phenylpropanoid C3'H/CYP98A low borderline
Psem4311940146300 Phenylpropanoid C3'H/CYP98A low borderline
Psem4318010148240 Phenylpropanoid C3'H/CYP98A low borderline
Psem4326870151210 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4342520157570 Phenylpropanoid C3'H/CYP98A low borderline
Psem4343160157830 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4343350157950 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4353420163290 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4354510163940 Phenylpropanoid C3'H/CYP98A low borderline
Psem4371280172330 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4371910172860 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4373580174090 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4375740175540 Phenylpropanoid C3'H/CYP98A low borderline
Psem4380080178410 Phenylpropanoid C3'H/CYP98A low borderline
Psem4386250182270 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4387250183160 Phenylpropanoid C3'H/CYP98A low borderline
Psem4393680187680 Phenylpropanoid C3'H/CYP98A medium pass
Psem4394820188760 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4399480192810 Phenylpropanoid C3'H/CYP98A medium pass
Psem4400410193540 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4407100199240 Phenylpropanoid C3'H/CYP98A low borderline
Psem4408230200150 Phenylpropanoid C3'H/CYP98A low borderline
Psem4409340201460 Phenylpropanoid C3'H/CYP98A low borderline
Psem4412460204520 Phenylpropanoid C3'H/CYP98A low borderline
Psem4415320207970 Phenylpropanoid C3'H/CYP98A low borderline
Psem4418780210970 Phenylpropanoid C3'H/CYP98A low borderline
Psem4419220211480 Phenylpropanoid C3'H/CYP98A low borderline
Psem4421230213600 Phenylpropanoid C3'H/CYP98A low borderline
Psem4423120215430 Phenylpropanoid C3'H/CYP98A low borderline
Psem4424150216850 Phenylpropanoid C3'H/CYP98A low borderline
Psem4424160216870 Phenylpropanoid C3'H/CYP98A low borderline
Psem4425380217840 Phenylpropanoid C3'H/CYP98A low borderline
Psem4425590218000 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4427800220610 Phenylpropanoid C3'H/CYP98A medium borderline