PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

962
Candidate Protein Records
683
Pathway-Level Records
1791
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Psem4162770120430 Rosmarinic Acid RAS low borderline
Psem4224290127630 Rosmarinic Acid RAS medium pass
Psem4228150128400 Rosmarinic Acid RAS low borderline
Psem4248100131960 Rosmarinic Acid RAS low borderline
Psem4386610182540 Rosmarinic Acid RAS low borderline
Psem4422070214560 Rosmarinic Acid RAS low borderline
Psem4424050216720 Rosmarinic Acid RAS low borderline
Psem4424050216730 Rosmarinic Acid RAS low borderline
Psem4451640251570 Rosmarinic Acid RAS low borderline
Psem4455220256530 Rosmarinic Acid RAS low borderline
Psem4455690257130 Rosmarinic Acid RAS medium pass
Psem4960297030 Rosmarinic Acid RAS medium pass
Psem6250302040 Rosmarinic Acid RAS low borderline
Psem6270302080 Rosmarinic Acid RAS low borderline
Psem6270302100 Rosmarinic Acid RAS medium pass
Psem7350305460 Rosmarinic Acid RAS low borderline
Psem8630310850 Rosmarinic Acid RAS medium pass
Psem4303230144020 Rosmarinic Acid TAT low borderline
Psem4321710149560 Rosmarinic Acid TAT low borderline
Psem4352710162910 Rosmarinic Acid TAT low borderline
Psem4363570168350 Rosmarinic Acid TAT low borderline
Psem4413020205170 Rosmarinic Acid TAT medium pass
Psem4416370208820 Rosmarinic Acid TAT medium pass
Psem2919000025530 Steroid BR6OX1/CYP85A1 low borderline
Psem3644430060550 Steroid BR6OX1/CYP85A1 medium borderline
Psem3786210063960 Steroid BR6OX1/CYP85A1 low borderline
Psem4194840124020 Steroid BR6OX1/CYP85A1 low borderline
Psem4302100143570 Steroid BR6OX1/CYP85A1 medium borderline
Psem4371910172860 Steroid BR6OX1/CYP85A1 medium borderline
Psem4408230200150 Steroid BR6OX1/CYP85A1 medium borderline
Psem4438740233220 Steroid BR6OX1/CYP85A1 medium borderline
Psem4460800264210 Steroid BR6OX1/CYP85A1 medium borderline
Psem1580009400 Steroid BR6OX2/CYP85A2 low borderline
Psem3859390073750 Steroid BR6OX2/CYP85A2 low borderline
Psem3959470089070 Steroid BR6OX2/CYP85A2 medium borderline
Psem4036980097200 Steroid BR6OX2/CYP85A2 low borderline
Psem4081430107630 Steroid BR6OX2/CYP85A2 low borderline
Psem4109070115530 Steroid BR6OX2/CYP85A2 low borderline
Psem4140880119370 Steroid BR6OX2/CYP85A2 low borderline
Psem4174680121690 Steroid BR6OX2/CYP85A2 low borderline
Psem4253270132470 Steroid BR6OX2/CYP85A2 low borderline
Psem4258290133310 Steroid BR6OX2/CYP85A2 low borderline
Psem4290260140470 Steroid BR6OX2/CYP85A2 low borderline
Psem4343350157950 Steroid BR6OX2/CYP85A2 low borderline
Psem4353420163290 Steroid BR6OX2/CYP85A2 low borderline
Psem4371280172330 Steroid BR6OX2/CYP85A2 low borderline
Psem4386250182270 Steroid BR6OX2/CYP85A2 low borderline
Psem4387250183160 Steroid BR6OX2/CYP85A2 low borderline
Psem4407100199240 Steroid BR6OX2/CYP85A2 low borderline
Psem4411000203030 Steroid BR6OX2/CYP85A2 low borderline