PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

962
Candidate Protein Records
683
Pathway-Level Records
1791
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Psem4447420245180 Terpenoid BAHD medium pass
Psem4447420245190 Terpenoid BAHD low borderline
Psem4447420245200 Terpenoid BAHD low borderline
Psem4447420245210 Terpenoid BAHD medium pass
Psem4448410246820 Terpenoid BAHD low borderline
Psem4451640251570 Terpenoid BAHD low borderline
Psem4452520252900 Terpenoid BAHD low borderline
Psem4454420255470 Terpenoid BAHD medium pass
Psem4455220256530 Terpenoid BAHD low borderline
Psem4455690257130 Terpenoid BAHD low borderline
Psem4455780257230 Terpenoid BAHD medium pass
Psem4456040257550 Terpenoid BAHD medium pass
Psem4456180257740 Terpenoid BAHD low borderline
Psem4461580265360 Terpenoid BAHD low borderline
Psem4461790265650 Terpenoid BAHD medium pass
Psem4466980272530 Terpenoid BAHD medium pass
Psem4467790273550 Terpenoid BAHD medium pass
Psem4598620280530 Terpenoid BAHD medium pass
Psem4598640280570 Terpenoid BAHD medium pass
Psem4632300281880 Terpenoid BAHD medium pass
Psem4632320281900 Terpenoid BAHD medium pass
Psem4635290281910 Terpenoid BAHD low borderline
Psem4635300281930 Terpenoid BAHD low borderline
Psem4647090282150 Terpenoid BAHD low borderline
Psem4647100282180 Terpenoid BAHD low borderline
Psem4675550283820 Terpenoid BAHD medium pass
Psem4675550283830 Terpenoid BAHD medium pass
Psem4675560283860 Terpenoid BAHD medium pass
Psem4675560283870 Terpenoid BAHD medium pass
Psem4721450295760 Terpenoid BAHD low borderline
Psem4721470295820 Terpenoid BAHD low borderline
Psem4960297030 Terpenoid BAHD medium pass
Psem5190297680 Terpenoid BAHD low borderline
Psem5190297690 Terpenoid BAHD low borderline
Psem5190297700 Terpenoid BAHD low borderline
Psem6250302040 Terpenoid BAHD low borderline
Psem6270302080 Terpenoid BAHD low borderline
Psem6270302100 Terpenoid BAHD medium pass
Psem7130304510 Terpenoid BAHD medium pass
Psem7350305460 Terpenoid BAHD low borderline
Psem7490306090 Terpenoid BAHD medium pass
Psem8240309610 Terpenoid BAHD low borderline
Psem8330310010 Terpenoid BAHD medium pass
Psem8340310040 Terpenoid BAHD medium pass
Psem8630310850 Terpenoid BAHD medium pass
Psem8820311840 Terpenoid BAHD medium pass
Psem960316280 Terpenoid BAHD medium pass
Psem4241620130390 Terpenoid CMK/IspE high pass
Psem4387210183140 Terpenoid CMK/IspE low borderline
Psem4688500286990 Terpenoid CMK/IspE medium pass