PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

859
Candidate Protein Records
607
Pathway-Level Records
1738
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Protein/Isoform Record Pathway Family Confidence Status
Palpscaffold_10002560 Flavonoid 4CL medium pass
Palpscaffold_20032200 Flavonoid 4CL low borderline
Palpscaffold_30056130 Flavonoid 4CL low borderline
Palpscaffold_30062070 Flavonoid 4CL low borderline
Palpscaffold_30065610 Flavonoid 4CL low borderline
Palpscaffold_30066910 Flavonoid 4CL low borderline
Palpscaffold_30067350 Flavonoid 4CL low borderline
Palpscaffold_30067370 Flavonoid 4CL medium pass
Palpscaffold_30071890 Flavonoid 4CL medium pass
Palpscaffold_40100130 Flavonoid 4CL medium pass
Palpscaffold_50119260 Flavonoid 4CL low borderline
Palpscaffold_50134270 Flavonoid 4CL low borderline
Palpscaffold_50135140 Flavonoid 4CL low borderline
Palpscaffold_50141780 Flavonoid 4CL medium pass
Palpscaffold_50143840 Flavonoid 4CL low borderline
Palpscaffold_50144380 Flavonoid 4CL medium pass
Palpscaffold_50144910 Flavonoid 4CL low borderline
Palpscaffold_60153520 Flavonoid 4CL medium pass
Palpscaffold_60153880 Flavonoid 4CL low borderline
Palpscaffold_60155610 Flavonoid 4CL medium pass
Palpscaffold_60172170 Flavonoid 4CL medium pass
Palpscaffold_60176400 Flavonoid 4CL medium pass
Palpscaffold_70200850 Flavonoid 4CL low borderline
Palpscaffold_10002560 Phenylpropanoid 4CL medium pass
Palpscaffold_20032200 Phenylpropanoid 4CL low borderline
Palpscaffold_30056130 Phenylpropanoid 4CL low borderline
Palpscaffold_30062070 Phenylpropanoid 4CL low borderline
Palpscaffold_30065610 Phenylpropanoid 4CL low borderline
Palpscaffold_30066910 Phenylpropanoid 4CL low borderline
Palpscaffold_30067350 Phenylpropanoid 4CL low borderline
Palpscaffold_30067370 Phenylpropanoid 4CL medium pass
Palpscaffold_30071890 Phenylpropanoid 4CL medium pass
Palpscaffold_40100130 Phenylpropanoid 4CL medium pass
Palpscaffold_50119260 Phenylpropanoid 4CL low borderline
Palpscaffold_50134270 Phenylpropanoid 4CL low borderline
Palpscaffold_50135140 Phenylpropanoid 4CL low borderline
Palpscaffold_50141780 Phenylpropanoid 4CL medium pass
Palpscaffold_50143840 Phenylpropanoid 4CL low borderline
Palpscaffold_50144380 Phenylpropanoid 4CL medium pass
Palpscaffold_50144910 Phenylpropanoid 4CL low borderline
Palpscaffold_60153520 Phenylpropanoid 4CL medium pass
Palpscaffold_60153880 Phenylpropanoid 4CL low borderline
Palpscaffold_60155610 Phenylpropanoid 4CL medium pass
Palpscaffold_60172170 Phenylpropanoid 4CL medium pass
Palpscaffold_60176400 Phenylpropanoid 4CL medium pass
Palpscaffold_70200850 Phenylpropanoid 4CL low borderline
Palpscaffold_10002560 Rosmarinic Acid 4CL medium pass
Palpscaffold_20032200 Rosmarinic Acid 4CL low borderline
Palpscaffold_30056130 Rosmarinic Acid 4CL low borderline
Palpscaffold_30062070 Rosmarinic Acid 4CL low borderline