PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

607
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Palpscaffold_10021040 Terpenoid AACT medium borderline
Palpscaffold_20040210 Terpenoid AACT medium borderline
Palpscaffold_20041770 Terpenoid AACT medium borderline
Palpscaffold_50141120 Terpenoid AACT medium borderline
Palpscaffold_60155120 Terpenoid AACT low borderline
Palpscaffold_60169530 Terpenoid AACT medium borderline
Palpscaffold_70200170 Terpenoid AACT low borderline
Palpscaffold_10004730 Terpenoid BAHD low borderline
Palpscaffold_10008220 Terpenoid BAHD low borderline
Palpscaffold_10010370 Terpenoid BAHD low borderline
Palpscaffold_10013470 Terpenoid BAHD medium pass
Palpscaffold_10015970 Terpenoid BAHD medium pass
Palpscaffold_10016030 Terpenoid BAHD low borderline
Palpscaffold_10021890 Terpenoid BAHD medium pass
Palpscaffold_20035050 Terpenoid BAHD medium pass
Palpscaffold_20040000 Terpenoid BAHD medium pass
Palpscaffold_20041020 Terpenoid BAHD medium pass
Palpscaffold_20041090 Terpenoid BAHD medium pass
Palpscaffold_20044540 Terpenoid BAHD medium pass
Palpscaffold_20046130 Terpenoid BAHD medium pass
Palpscaffold_20046430 Terpenoid BAHD medium pass
Palpscaffold_20047540 Terpenoid BAHD medium pass
Palpscaffold_210053960 Terpenoid BAHD medium pass
Palpscaffold_30055830 Terpenoid BAHD medium pass
Palpscaffold_30059430 Terpenoid BAHD medium pass
Palpscaffold_30059500 Terpenoid BAHD medium pass
Palpscaffold_30061720 Terpenoid BAHD medium pass
Palpscaffold_30062330 Terpenoid BAHD low borderline
Palpscaffold_30073920 Terpenoid BAHD low borderline
Palpscaffold_40079620 Terpenoid BAHD medium pass
Palpscaffold_40081440 Terpenoid BAHD medium pass
Palpscaffold_40081530 Terpenoid BAHD medium pass
Palpscaffold_40083350 Terpenoid BAHD medium pass
Palpscaffold_40084350 Terpenoid BAHD low borderline
Palpscaffold_40085960 Terpenoid BAHD medium pass
Palpscaffold_40088350 Terpenoid BAHD low borderline
Palpscaffold_40088480 Terpenoid BAHD low borderline
Palpscaffold_40099370 Terpenoid BAHD medium pass
Palpscaffold_40101430 Terpenoid BAHD low borderline
Palpscaffold_50109370 Terpenoid BAHD medium pass
Palpscaffold_50109700 Terpenoid BAHD medium pass
Palpscaffold_50110750 Terpenoid BAHD medium pass
Palpscaffold_50111910 Terpenoid BAHD medium pass
Palpscaffold_50111920 Terpenoid BAHD medium pass
Palpscaffold_50116660 Terpenoid BAHD medium pass
Palpscaffold_50117540 Terpenoid BAHD medium pass
Palpscaffold_50126290 Terpenoid BAHD medium pass
Palpscaffold_50128870 Terpenoid BAHD low borderline
Palpscaffold_50128880 Terpenoid BAHD low borderline
Palpscaffold_50130370 Terpenoid BAHD medium pass