PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

607
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Palpscaffold_50135040 Terpenoid BAHD medium pass
Palpscaffold_50135150 Terpenoid BAHD medium pass
Palpscaffold_50140840 Terpenoid BAHD medium pass
Palpscaffold_60149610 Terpenoid BAHD medium pass
Palpscaffold_60150230 Terpenoid BAHD low borderline
Palpscaffold_60152220 Terpenoid BAHD low borderline
Palpscaffold_60154020 Terpenoid BAHD medium pass
Palpscaffold_60154030 Terpenoid BAHD low borderline
Palpscaffold_60161220 Terpenoid BAHD medium pass
Palpscaffold_60169820 Terpenoid BAHD medium pass
Palpscaffold_60175030 Terpenoid BAHD low borderline
Palpscaffold_60175310 Terpenoid BAHD medium pass
Palpscaffold_60176580 Terpenoid BAHD medium pass
Palpscaffold_70180000 Terpenoid BAHD low borderline
Palpscaffold_70180810 Terpenoid BAHD medium pass
Palpscaffold_70183600 Terpenoid BAHD medium pass
Palpscaffold_70184010 Terpenoid BAHD low borderline
Palpscaffold_70184370 Terpenoid BAHD medium pass
Palpscaffold_70184430 Terpenoid BAHD low borderline
Palpscaffold_70184440 Terpenoid BAHD low borderline
Palpscaffold_70190910 Terpenoid BAHD medium pass
Palpscaffold_70192470 Terpenoid BAHD low borderline
Palpscaffold_70193250 Terpenoid BAHD low borderline
Palpscaffold_70195890 Terpenoid BAHD medium pass
Palpscaffold_70196470 Terpenoid BAHD medium pass
Palpscaffold_70198080 Terpenoid BAHD low borderline
Palpscaffold_70198220 Terpenoid BAHD low borderline
Palpscaffold_70199490 Terpenoid BAHD medium pass
Palpscaffold_70200480 Terpenoid BAHD low borderline
Palpscaffold_70201210 Terpenoid BAHD medium pass
Palpscaffold_70208000 Terpenoid BAHD low borderline
Palpscaffold_70213210 Terpenoid BAHD low borderline
Palpscaffold_70213480 Terpenoid BAHD low borderline
Palpscaffold_70215980 Terpenoid BAHD medium pass
Palpscaffold_80222310 Terpenoid BAHD medium pass
Palpscaffold_60158550 Terpenoid CMK/IspE high pass
Palpscaffold_10021720 Terpenoid CYP71 medium pass
Palpscaffold_20034920 Terpenoid CYP71 medium borderline
Palpscaffold_30063950 Terpenoid CYP71 low borderline
Palpscaffold_40080300 Terpenoid CYP71 medium pass
Palpscaffold_50107990 Terpenoid CYP71 low borderline
Palpscaffold_50119200 Terpenoid CYP71 medium pass
Palpscaffold_50119490 Terpenoid CYP71 low borderline
Palpscaffold_50130290 Terpenoid CYP71 low borderline
Palpscaffold_50133940 Terpenoid CYP71 medium pass
Palpscaffold_50135050 Terpenoid CYP71 medium pass
Palpscaffold_50143620 Terpenoid CYP71 medium pass
Palpscaffold_60153940 Terpenoid CYP71 medium pass
Palpscaffold_60164150 Terpenoid CYP71 medium pass
Palpscaffold_60168680 Terpenoid CYP71 low borderline