PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

607
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Palpscaffold_50122460 Steroid CAS medium pass
Palpscaffold_50139990 Steroid CAS medium pass
Palpscaffold_50140140 Steroid CAS medium pass
Palpscaffold_70210690 Steroid CAS medium pass
Palpscaffold_70211260 Steroid CAS medium pass
Palpscaffold_10020330 Steroid CPD/CYP90A1 medium borderline
Palpscaffold_40080120 Steroid CPD/CYP90A1 medium borderline
Palpscaffold_40080430 Steroid CPD/CYP90A1 medium borderline
Palpscaffold_40099680 Steroid CPD/CYP90A1 medium borderline
Palpscaffold_50139500 Steroid CPD/CYP90A1 low borderline
Palpscaffold_60151980 Steroid CPD/CYP90A1 low borderline
Palpscaffold_60154170 Steroid CPD/CYP90A1 medium borderline
Palpscaffold_60160390 Steroid CPD/CYP90A1 medium borderline
Palpscaffold_70186220 Steroid CPD/CYP90A1 low borderline
Palpscaffold_70209000 Steroid CPD/CYP90A1 low borderline
Palpscaffold_70211940 Steroid CPD/CYP90A1 medium borderline
Palpscaffold_70213150 Steroid CPD/CYP90A1 medium borderline
Palpscaffold_30061780 Steroid CPI1 high pass
Palpscaffold_10006800 Steroid CYP51G1 medium borderline
Palpscaffold_10026260 Steroid CYP90D1 low borderline
Palpscaffold_50136420 Steroid CYP90D1 medium borderline
Palpscaffold_50138460 Steroid CYP90D1 low borderline
Palpscaffold_60158340 Steroid CYP90D1 low borderline
Palpscaffold_60160380 Steroid CYP90D1 medium borderline
Palpscaffold_60170320 Steroid CYP90D1 low borderline
Palpscaffold_60173860 Steroid CYP90D1 low borderline
Palpscaffold_50132310 Steroid DET2 medium pass
Palpscaffold_70195790 Steroid DET2 low borderline
Palpscaffold_70198010 Steroid DET2 low borderline
Palpscaffold_10020850 Steroid DWF1 medium pass
Palpscaffold_10020860 Steroid DWF1 medium pass
Palpscaffold_70212140 Steroid DWF1 medium pass
Palpscaffold_10009080 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_10013180 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_10019030 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_10019780 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_10021010 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_10022410 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_10022420 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_10022550 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_20031410 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_20035800 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_20036380 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_20036760 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_20040940 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_20043640 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_20044950 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_20045020 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_20045080 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_20045720 Steroid DWF4/CYP90B1 low borderline