PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

607
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Palpscaffold_30057880 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_30058720 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_30060290 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_30062750 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_30066170 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_30066180 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_30069620 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_40089280 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_40089420 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_40089440 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_40089450 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_40096230 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_50104910 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_50116970 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_50126950 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_60149810 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_60154200 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_60154210 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_60158350 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_60166020 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_60168130 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_60173330 Steroid DWF4/CYP90B1 medium borderline
Palpscaffold_60175950 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_70181730 Steroid DWF4/CYP90B1 medium borderline
Palpscaffold_70197560 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_70197760 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_70202810 Steroid DWF4/CYP90B1 medium borderline
Palpscaffold_70206650 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_70211920 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_70212060 Steroid DWF4/CYP90B1 low borderline
Palpscaffold_10005340 Steroid DWF5 medium pass
Palpscaffold_60152400 Steroid DWF5 medium borderline
Palpscaffold_60160660 Steroid DWF7 medium pass
Palpscaffold_20035650 Steroid FK high pass
Palpscaffold_70202690 Steroid HYD1 high pass
Palpscaffold_40101330 Steroid ROT3/CYP90C1 low borderline
Palpscaffold_60170470 Steroid ROT3/CYP90C1 low borderline
Palpscaffold_70181710 Steroid ROT3/CYP90C1 medium borderline
Palpscaffold_10001890 Steroid SMO1/SMO2 medium pass
Palpscaffold_30058840 Steroid SMO1/SMO2 low borderline
Palpscaffold_40083480 Steroid SMO1/SMO2 medium pass
Palpscaffold_60169570 Steroid SMO1/SMO2 medium pass
Palpscaffold_60169600 Steroid SMO1/SMO2 medium pass
Palpscaffold_10005890 Steroid SMT1/SMT2/SMT3 medium pass
Palpscaffold_20044540 Steroid SMT1/SMT2/SMT3 medium pass
Palpscaffold_30062330 Steroid SMT1/SMT2/SMT3 low borderline
Palpscaffold_30073920 Steroid SMT1/SMT2/SMT3 medium pass
Palpscaffold_40087160 Steroid SMT1/SMT2/SMT3 low borderline
Palpscaffold_40101430 Steroid SMT1/SMT2/SMT3 low borderline
Palpscaffold_50116930 Steroid SMT1/SMT2/SMT3 low borderline