PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

607
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Palpscaffold_60167980 Phenylpropanoid C4H/CYP73A low borderline
Palpscaffold_60168860 Phenylpropanoid C4H/CYP73A medium borderline
Palpscaffold_80222530 Phenylpropanoid C4H/CYP73A low borderline
Palpscaffold_10005300 Phenylpropanoid CAD medium borderline
Palpscaffold_10008730 Phenylpropanoid CAD low borderline
Palpscaffold_10010960 Phenylpropanoid CAD low borderline
Palpscaffold_30063110 Phenylpropanoid CAD low borderline
Palpscaffold_30074340 Phenylpropanoid CAD low borderline
Palpscaffold_40083960 Phenylpropanoid CAD low borderline
Palpscaffold_40085460 Phenylpropanoid CAD medium pass
Palpscaffold_50135910 Phenylpropanoid CAD medium pass
Palpscaffold_50145320 Phenylpropanoid CAD medium pass
Palpscaffold_60172110 Phenylpropanoid CAD medium pass
Palpscaffold_10000600 Phenylpropanoid CCR low borderline
Palpscaffold_10010260 Phenylpropanoid CCR low borderline
Palpscaffold_10012700 Phenylpropanoid CCR low borderline
Palpscaffold_50123530 Phenylpropanoid CCR medium borderline
Palpscaffold_60158730 Phenylpropanoid CCR medium borderline
Palpscaffold_60162930 Phenylpropanoid CCR medium borderline
Palpscaffold_70180580 Phenylpropanoid CCR low borderline
Palpscaffold_70190700 Phenylpropanoid CCR medium pass
Palpscaffold_80220140 Phenylpropanoid CCR low borderline
Palpscaffold_70191580 Phenylpropanoid CCoAOMT medium pass
Palpscaffold_70199460 Phenylpropanoid CCoAOMT low borderline
Palpscaffold_20038540 Phenylpropanoid COMT medium pass
Palpscaffold_20038720 Phenylpropanoid COMT low borderline
Palpscaffold_20038880 Phenylpropanoid COMT medium pass
Palpscaffold_20040450 Phenylpropanoid COMT low borderline
Palpscaffold_20040970 Phenylpropanoid COMT medium pass
Palpscaffold_20040980 Phenylpropanoid COMT medium pass
Palpscaffold_20047980 Phenylpropanoid COMT low borderline
Palpscaffold_20048760 Phenylpropanoid COMT low borderline
Palpscaffold_20050390 Phenylpropanoid COMT low borderline
Palpscaffold_20053340 Phenylpropanoid COMT medium pass
Palpscaffold_210053980 Phenylpropanoid COMT low borderline
Palpscaffold_30056080 Phenylpropanoid COMT low borderline
Palpscaffold_40080140 Phenylpropanoid COMT medium pass
Palpscaffold_40080150 Phenylpropanoid COMT medium pass
Palpscaffold_40087540 Phenylpropanoid COMT medium pass
Palpscaffold_40089520 Phenylpropanoid COMT medium pass
Palpscaffold_40094490 Phenylpropanoid COMT low borderline
Palpscaffold_60166220 Phenylpropanoid COMT medium pass
Palpscaffold_60166230 Phenylpropanoid COMT low borderline
Palpscaffold_60166240 Phenylpropanoid COMT low borderline
Palpscaffold_60166260 Phenylpropanoid COMT low borderline
Palpscaffold_60168100 Phenylpropanoid COMT low borderline
Palpscaffold_60171980 Phenylpropanoid COMT medium pass
Palpscaffold_60175150 Phenylpropanoid COMT medium pass
Palpscaffold_60175160 Phenylpropanoid COMT medium pass
Palpscaffold_70211300 Phenylpropanoid COMT medium pass