PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

607
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Palpscaffold_10006680 Phenylpropanoid CSE medium pass
Palpscaffold_10011430 Phenylpropanoid CSE medium pass
Palpscaffold_20032620 Phenylpropanoid CSE low borderline
Palpscaffold_20035280 Phenylpropanoid CSE medium pass
Palpscaffold_50119680 Phenylpropanoid CSE medium pass
Palpscaffold_60158900 Phenylpropanoid CSE medium pass
Palpscaffold_60167880 Phenylpropanoid CSE medium pass
Palpscaffold_60172310 Phenylpropanoid CSE medium pass
Palpscaffold_70199440 Phenylpropanoid CSE low borderline
Palpscaffold_70199850 Phenylpropanoid CSE medium pass
Palpscaffold_10006800 Phenylpropanoid F5H/CYP84A medium borderline
Palpscaffold_40089280 Phenylpropanoid F5H/CYP84A medium borderline
Palpscaffold_40099690 Phenylpropanoid F5H/CYP84A medium borderline
Palpscaffold_10015970 Phenylpropanoid HCT medium pass
Palpscaffold_10016030 Phenylpropanoid HCT medium pass
Palpscaffold_10021890 Phenylpropanoid HCT medium pass
Palpscaffold_10026140 Phenylpropanoid HCT low borderline
Palpscaffold_40088350 Phenylpropanoid HCT medium pass
Palpscaffold_50128870 Phenylpropanoid HCT medium pass
Palpscaffold_50128880 Phenylpropanoid HCT medium pass
Palpscaffold_60164950 Phenylpropanoid HCT low borderline
Palpscaffold_70180000 Phenylpropanoid HCT medium pass
Palpscaffold_70183600 Phenylpropanoid HCT medium pass
Palpscaffold_70184430 Phenylpropanoid HCT low borderline
Palpscaffold_70184440 Phenylpropanoid HCT low borderline
Palpscaffold_70196470 Phenylpropanoid HCT medium pass
Palpscaffold_70215980 Phenylpropanoid HCT medium pass
Palpscaffold_10020260 Phenylpropanoid LAC low borderline
Palpscaffold_30055500 Phenylpropanoid LAC low borderline
Palpscaffold_30056010 Phenylpropanoid LAC low borderline
Palpscaffold_30070240 Phenylpropanoid LAC medium pass
Palpscaffold_30070250 Phenylpropanoid LAC medium pass
Palpscaffold_30070260 Phenylpropanoid LAC medium pass
Palpscaffold_40093220 Phenylpropanoid LAC medium pass
Palpscaffold_50109960 Phenylpropanoid LAC medium pass
Palpscaffold_50110030 Phenylpropanoid LAC medium pass
Palpscaffold_50110050 Phenylpropanoid LAC medium pass
Palpscaffold_50110090 Phenylpropanoid LAC medium pass
Palpscaffold_50110110 Phenylpropanoid LAC medium pass
Palpscaffold_50110130 Phenylpropanoid LAC medium pass
Palpscaffold_50110140 Phenylpropanoid LAC medium pass
Palpscaffold_50110210 Phenylpropanoid LAC medium pass
Palpscaffold_50115620 Phenylpropanoid LAC low borderline
Palpscaffold_50115630 Phenylpropanoid LAC medium pass
Palpscaffold_50126090 Phenylpropanoid LAC medium pass
Palpscaffold_60156610 Phenylpropanoid LAC medium pass
Palpscaffold_60173910 Phenylpropanoid LAC medium pass
Palpscaffold_10019440 Phenylpropanoid PAL high pass
Palpscaffold_10025230 Phenylpropanoid PAL high pass
Palpscaffold_10028160 Phenylpropanoid PAL medium pass