PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

607
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status Best Target
Palpscaffold_50116970 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Palpscaffold_50119120 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Palpscaffold_50124200 Terpenoid CYP76 low borderline CYP76__00007__sp_A0A1D8QMD2_C76K7_ROSOF
Palpscaffold_50125290 Terpenoid CYP76 medium borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Palpscaffold_50126950 Terpenoid CYP76 medium pass CYP76__00013__sp_D1MI46_C76BA_SWEMU
Palpscaffold_50129760 Terpenoid CYP76 low borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Palpscaffold_50130140 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Palpscaffold_50135090 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Palpscaffold_50138460 Terpenoid CYP76 medium borderline CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
Palpscaffold_60149810 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Palpscaffold_60150710 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Palpscaffold_60150720 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Palpscaffold_60150930 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Palpscaffold_60150940 Terpenoid CYP76 medium pass CYP76__00023__sp_S4UX02_CYPH1_SALMI
Palpscaffold_60160530 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Palpscaffold_60166020 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Palpscaffold_60167990 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Palpscaffold_60168130 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Palpscaffold_60168860 Terpenoid CYP76 medium pass CYP76__00023__sp_S4UX02_CYPH1_SALMI
Palpscaffold_60170320 Terpenoid CYP76 medium pass CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
Palpscaffold_60172570 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Palpscaffold_60173120 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Palpscaffold_60173130 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Palpscaffold_60175950 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Palpscaffold_60175970 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Palpscaffold_60175980 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Palpscaffold_60175990 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Palpscaffold_60176230 Terpenoid CYP76 low borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Palpscaffold_70187100 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Palpscaffold_70189450 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Palpscaffold_70192130 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Palpscaffold_70192480 Terpenoid CYP76 medium borderline CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
Palpscaffold_70197560 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Palpscaffold_70197760 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Palpscaffold_70201370 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Palpscaffold_70202810 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Palpscaffold_70202870 Terpenoid CYP76 low borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
Palpscaffold_70206650 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Palpscaffold_70207110 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Palpscaffold_70211920 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Palpscaffold_70212060 Terpenoid CYP76 medium borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Palpscaffold_70188070 Terpenoid DXR high pass DXR__00001__sp_Q9XFS9_DXR_ARATH
Palpscaffold_50137190 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
Palpscaffold_50137580 Terpenoid DXS low borderline DXS__00001__sp_Q38854_DXS_ARATH
Palpscaffold_50137920 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
Palpscaffold_60163290 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
Palpscaffold_60163320 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
Palpscaffold_70203560 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
Palpscaffold_70216240 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
Palpscaffold_50140530 Terpenoid FPPS low borderline FPPS__00001__sp_B8XA40_ZFPS_SOLHA