PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

607
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Palpscaffold_70196480 Terpenoid FPPS medium pass
Palpscaffold_20040800 Terpenoid GGPPS medium borderline
Palpscaffold_60175470 Terpenoid GGPPS medium borderline
Palpscaffold_70192780 Terpenoid GGPPS medium borderline
Palpscaffold_70212390 Terpenoid GGPPS medium borderline
Palpscaffold_30075160 Terpenoid GPPS medium borderline
Palpscaffold_10025280 Terpenoid HDR/IspH high pass
Palpscaffold_60171010 Terpenoid HDS/IspG high pass
Palpscaffold_20033630 Terpenoid HMGR medium pass
Palpscaffold_30059860 Terpenoid HMGR low borderline
Palpscaffold_30076320 Terpenoid HMGR medium pass
Palpscaffold_60168390 Terpenoid HMGS low borderline
Palpscaffold_70182980 Terpenoid HMGS high pass
Palpscaffold_10007800 Terpenoid IDI low borderline
Palpscaffold_70204510 Terpenoid IDI low borderline
Palpscaffold_70217820 Terpenoid IDI medium pass
Palpscaffold_70209750 Terpenoid MCT/IspD low borderline
Palpscaffold_60156590 Terpenoid MDS/IspF high pass
Palpscaffold_70191730 Terpenoid MDS/IspF low borderline
Palpscaffold_10006200 Terpenoid MVD low borderline
Palpscaffold_10021770 Terpenoid MVD medium pass
Palpscaffold_10017930 Terpenoid MVK low borderline
Palpscaffold_10027470 Terpenoid MVK low borderline
Palpscaffold_70217880 Terpenoid MVK medium pass
Palpscaffold_60160680 Terpenoid PMK medium pass
Palpscaffold_50140340 Terpenoid TPS low borderline
Palpscaffold_10000840 Terpenoid UGT medium pass
Palpscaffold_10004280 Terpenoid UGT low borderline
Palpscaffold_10009920 Terpenoid UGT medium pass
Palpscaffold_10010880 Terpenoid UGT medium pass
Palpscaffold_10027800 Terpenoid UGT medium pass
Palpscaffold_20051830 Terpenoid UGT low borderline
Palpscaffold_20052240 Terpenoid UGT medium pass
Palpscaffold_30059840 Terpenoid UGT medium pass
Palpscaffold_30063230 Terpenoid UGT medium pass
Palpscaffold_30065700 Terpenoid UGT low borderline
Palpscaffold_30075960 Terpenoid UGT low borderline
Palpscaffold_30077440 Terpenoid UGT medium pass
Palpscaffold_30077580 Terpenoid UGT medium pass
Palpscaffold_40084440 Terpenoid UGT medium pass
Palpscaffold_40093920 Terpenoid UGT low borderline
Palpscaffold_40093930 Terpenoid UGT medium pass
Palpscaffold_40096090 Terpenoid UGT medium pass
Palpscaffold_50108920 Terpenoid UGT low borderline
Palpscaffold_50117670 Terpenoid UGT low borderline
Palpscaffold_50135740 Terpenoid UGT medium pass
Palpscaffold_50135770 Terpenoid UGT medium pass
Palpscaffold_60148860 Terpenoid UGT medium pass
Palpscaffold_60155420 Terpenoid UGT medium pass
Palpscaffold_60169170 Terpenoid UGT medium pass