PlantSME Plant secondary metabolism enzyme database

Pyrrhobryum spiniforme (pyrrhobryum_spiniforme)

Imported from atlas release summary for Pyrrhobryum spiniforme.

757
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 175 10 POD (83) View species results
Alkaloid pathway 166 16 PYKS (51) View species results
Terpenoid pathway 150 19 BAHD (65) View species results
Flavonoid pathway 141 9 CHS (61) View species results
Rosmarinic acid pathway 82 7 C4H (31) View species results
Steroid pathway 43 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 631 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Pspiscaffold_80235130 Rosmarinic Acid C4H low borderline
Pspiscaffold_80237500 Rosmarinic Acid C4H medium pass
Pspiscaffold_80237510 Rosmarinic Acid C4H medium pass
Pspiscaffold_80238620 Rosmarinic Acid C4H medium pass
Pspiscaffold_80240940 Rosmarinic Acid C4H medium pass
Pspiscaffold_80241820 Rosmarinic Acid C4H low borderline
Pspiscaffold_80244980 Rosmarinic Acid C4H low borderline
Pspiscaffold_80254310 Rosmarinic Acid C4H medium pass
Pspiscaffold_90261720 Rosmarinic Acid C4H low borderline
Pspiscaffold_90263030 Rosmarinic Acid C4H low borderline
Pspiscaffold_90263240 Rosmarinic Acid C4H low borderline
Pspiscaffold_90263330 Rosmarinic Acid C4H medium pass
Pspiscaffold_90263340 Rosmarinic Acid C4H medium pass
Pspiscaffold_90269030 Rosmarinic Acid C4H medium pass
Pspiscaffold_90269040 Rosmarinic Acid C4H medium pass
Pspiscaffold_90269050 Rosmarinic Acid C4H medium pass
Pspiscaffold_90270040 Rosmarinic Acid C4H low borderline
Pspiscaffold_90270070 Rosmarinic Acid C4H low borderline
Pspiscaffold_90270470 Rosmarinic Acid C4H low borderline
Pspiscaffold_90271920 Rosmarinic Acid C4H low borderline
Pspiscaffold_90271940 Rosmarinic Acid C4H low borderline
Pspiscaffold_90287580 Rosmarinic Acid C4H low borderline
Pspiscaffold_90292620 Rosmarinic Acid C4H low borderline
Pspiscaffold_90292690 Rosmarinic Acid C4H low borderline
Pspiscaffold_90293630 Rosmarinic Acid C4H low borderline
Pspiscaffold_90294500 Rosmarinic Acid C4H low borderline
Pspiscaffold_90295460 Rosmarinic Acid C4H low borderline
Pspiscaffold_90295480 Rosmarinic Acid C4H low borderline
Pspiscaffold_90295510 Rosmarinic Acid C4H medium pass
Pspiscaffold_90298620 Rosmarinic Acid C4H low borderline
Pspiscaffold_910299160 Rosmarinic Acid C4H low borderline
Pspiscaffold_60144360 Rosmarinic Acid CPR medium pass
Pspiscaffold_70151920 Rosmarinic Acid CPR medium pass
Pspiscaffold_70177710 Rosmarinic Acid CPR medium pass
Pspiscaffold_80219260 Rosmarinic Acid CPR low borderline
Pspiscaffold_90272830 Rosmarinic Acid CPR medium pass
Pspiscaffold_50116450 Rosmarinic Acid HPPR medium pass
Pspiscaffold_100024710 Rosmarinic Acid PAL medium pass
Pspiscaffold_10014710 Rosmarinic Acid PAL low borderline
Pspiscaffold_20040770 Rosmarinic Acid PAL high pass
Pspiscaffold_30056450 Rosmarinic Acid PAL high pass
Pspiscaffold_30056740 Rosmarinic Acid PAL medium pass
Pspiscaffold_30056750 Rosmarinic Acid PAL high pass
Pspiscaffold_30060040 Rosmarinic Acid PAL high pass
Pspiscaffold_30062300 Rosmarinic Acid PAL high pass
Pspiscaffold_30062720 Rosmarinic Acid PAL medium pass
Pspiscaffold_30062730 Rosmarinic Acid PAL high pass
Pspiscaffold_50103220 Rosmarinic Acid PAL high pass
Pspiscaffold_60124810 Rosmarinic Acid PAL medium pass
Pspiscaffold_60138050 Rosmarinic Acid PAL low borderline