PlantSME Plant secondary metabolism enzyme database

Pyrrhobryum spiniforme (pyrrhobryum_spiniforme)

Imported from atlas release summary for Pyrrhobryum spiniforme.

757
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 175 10 POD (83) View species results
Alkaloid pathway 166 16 PYKS (51) View species results
Terpenoid pathway 150 19 BAHD (65) View species results
Flavonoid pathway 141 9 CHS (61) View species results
Rosmarinic acid pathway 82 7 C4H (31) View species results
Steroid pathway 43 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 631 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Pspiscaffold_70151210 Rosmarinic Acid PAL medium pass
Pspiscaffold_70151410 Rosmarinic Acid PAL medium pass
Pspiscaffold_70151420 Rosmarinic Acid PAL high pass
Pspiscaffold_70151430 Rosmarinic Acid PAL medium pass
Pspiscaffold_70184120 Rosmarinic Acid PAL high pass
Pspiscaffold_80216010 Rosmarinic Acid PAL medium pass
Pspiscaffold_80216050 Rosmarinic Acid PAL medium pass
Pspiscaffold_80247870 Rosmarinic Acid PAL high pass
Pspiscaffold_80247960 Rosmarinic Acid PAL high pass
Pspiscaffold_80248310 Rosmarinic Acid PAL high pass
Pspiscaffold_80248350 Rosmarinic Acid PAL medium pass
Pspiscaffold_90271290 Rosmarinic Acid PAL high pass
Pspiscaffold_90273710 Rosmarinic Acid PAL high pass
Pspiscaffold_10013240 Rosmarinic Acid RAS medium pass
Pspiscaffold_10018560 Rosmarinic Acid RAS low borderline
Pspiscaffold_20049320 Rosmarinic Acid RAS low borderline
Pspiscaffold_20049330 Rosmarinic Acid RAS low borderline
Pspiscaffold_30071830 Rosmarinic Acid RAS low borderline
Pspiscaffold_60127170 Rosmarinic Acid RAS low borderline
Pspiscaffold_60133470 Rosmarinic Acid RAS medium pass
Pspiscaffold_60137620 Rosmarinic Acid RAS low borderline
Pspiscaffold_70169890 Rosmarinic Acid RAS low borderline
Pspiscaffold_70177690 Rosmarinic Acid RAS low borderline
Pspiscaffold_70186610 Rosmarinic Acid RAS medium pass
Pspiscaffold_70201100 Rosmarinic Acid RAS medium pass
Pspiscaffold_80251860 Rosmarinic Acid RAS medium pass
Pspiscaffold_30060300 Rosmarinic Acid TAT low borderline
Pspiscaffold_70154410 Rosmarinic Acid TAT medium pass
Pspiscaffold_70197490 Rosmarinic Acid TAT low borderline
Pspiscaffold_80250410 Rosmarinic Acid TAT medium pass
Pspiscaffold_90293140 Rosmarinic Acid TAT medium pass