PlantSME Plant secondary metabolism enzyme database

Pyrrhobryum spiniforme (pyrrhobryum_spiniforme)

Imported from atlas release summary for Pyrrhobryum spiniforme.

757
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 175 10 POD (83) View species results
Alkaloid pathway 166 16 PYKS (51) View species results
Terpenoid pathway 150 19 BAHD (65) View species results
Flavonoid pathway 141 9 CHS (61) View species results
Rosmarinic acid pathway 82 7 C4H (31) View species results
Steroid pathway 43 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 631 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Pspiscaffold_70156880 Terpenoid CYP76 low borderline
Pspiscaffold_70158450 Terpenoid CYP76 low borderline
Pspiscaffold_70160990 Terpenoid CYP76 medium pass
Pspiscaffold_70162510 Terpenoid CYP76 medium borderline
Pspiscaffold_70162520 Terpenoid CYP76 medium pass
Pspiscaffold_70163720 Terpenoid CYP76 low borderline
Pspiscaffold_70164310 Terpenoid CYP76 medium borderline
Pspiscaffold_70167630 Terpenoid CYP76 medium borderline
Pspiscaffold_70178160 Terpenoid CYP76 medium borderline
Pspiscaffold_70178240 Terpenoid CYP76 medium borderline
Pspiscaffold_70182500 Terpenoid CYP76 medium borderline
Pspiscaffold_70201220 Terpenoid CYP76 medium pass
Pspiscaffold_80206600 Terpenoid CYP76 medium pass
Pspiscaffold_80211430 Terpenoid CYP76 medium pass
Pspiscaffold_80216150 Terpenoid CYP76 medium borderline
Pspiscaffold_80217420 Terpenoid CYP76 medium pass
Pspiscaffold_80225010 Terpenoid CYP76 medium pass
Pspiscaffold_80228020 Terpenoid CYP76 medium borderline
Pspiscaffold_80231580 Terpenoid CYP76 low borderline
Pspiscaffold_80231840 Terpenoid CYP76 low borderline
Pspiscaffold_80235000 Terpenoid CYP76 medium pass
Pspiscaffold_80235130 Terpenoid CYP76 medium borderline
Pspiscaffold_80237500 Terpenoid CYP76 medium pass
Pspiscaffold_80237510 Terpenoid CYP76 medium pass
Pspiscaffold_80238620 Terpenoid CYP76 medium pass
Pspiscaffold_80240940 Terpenoid CYP76 medium pass
Pspiscaffold_80254310 Terpenoid CYP76 medium borderline
Pspiscaffold_90261720 Terpenoid CYP76 medium borderline
Pspiscaffold_90263030 Terpenoid CYP76 medium borderline
Pspiscaffold_90263240 Terpenoid CYP76 low borderline
Pspiscaffold_90263330 Terpenoid CYP76 medium borderline
Pspiscaffold_90263340 Terpenoid CYP76 medium borderline
Pspiscaffold_90269030 Terpenoid CYP76 medium borderline
Pspiscaffold_90269040 Terpenoid CYP76 medium borderline
Pspiscaffold_90269050 Terpenoid CYP76 medium borderline
Pspiscaffold_90269500 Terpenoid CYP76 low borderline
Pspiscaffold_90270470 Terpenoid CYP76 medium borderline
Pspiscaffold_90293630 Terpenoid CYP76 medium borderline
Pspiscaffold_90294500 Terpenoid CYP76 medium pass
Pspiscaffold_90295460 Terpenoid CYP76 low borderline
Pspiscaffold_90295480 Terpenoid CYP76 medium borderline
Pspiscaffold_90295510 Terpenoid CYP76 medium borderline
Pspiscaffold_40080590 Terpenoid DXR high pass
Pspiscaffold_70158540 Terpenoid DXR high pass
Pspiscaffold_70180280 Terpenoid DXS medium pass
Pspiscaffold_90274980 Terpenoid DXS low borderline
Pspiscaffold_10005170 Terpenoid FPPS medium pass
Pspiscaffold_70159650 Terpenoid FPPS medium pass
Pspiscaffold_10003470 Terpenoid GGPPS medium borderline
Pspiscaffold_20053590 Terpenoid GGPPS low borderline