PlantSME Plant secondary metabolism enzyme database

Pyrrhobryum spiniforme (pyrrhobryum_spiniforme)

Imported from atlas release summary for Pyrrhobryum spiniforme.

757
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 175 10 POD (83) View species results
Alkaloid pathway 166 16 PYKS (51) View species results
Terpenoid pathway 150 19 BAHD (65) View species results
Flavonoid pathway 141 9 CHS (61) View species results
Rosmarinic acid pathway 82 7 C4H (31) View species results
Steroid pathway 43 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 631 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Pspiscaffold_70192540 Terpenoid GGPPS medium borderline
Pspiscaffold_80257130 Terpenoid GGPPS medium borderline
Pspiscaffold_90267030 Terpenoid GGPPS medium borderline
Pspiscaffold_10020620 Terpenoid HDR/IspH high pass
Pspiscaffold_60121780 Terpenoid HDR/IspH high pass
Pspiscaffold_100023580 Terpenoid HDS/IspG high pass
Pspiscaffold_70176360 Terpenoid HDS/IspG medium pass
Pspiscaffold_70197150 Terpenoid HDS/IspG medium pass
Pspiscaffold_70201770 Terpenoid HDS/IspG low borderline
Pspiscaffold_80252690 Terpenoid HDS/IspG high pass
Pspiscaffold_90298230 Terpenoid HDS/IspG high pass
Pspiscaffold_70181600 Terpenoid HMGR medium pass
Pspiscaffold_10014200 Terpenoid HMGS low borderline
Pspiscaffold_60119900 Terpenoid HMGS high pass
Pspiscaffold_10011240 Terpenoid IDI medium pass
Pspiscaffold_50106760 Terpenoid MCT/IspD low borderline
Pspiscaffold_70159740 Terpenoid MCT/IspD high pass
Pspiscaffold_50097730 Terpenoid MDS/IspF high pass
Pspiscaffold_110032820 Terpenoid MVD low borderline
Pspiscaffold_20050870 Terpenoid MVD medium pass
Pspiscaffold_20052840 Terpenoid MVK low borderline
Pspiscaffold_30060960 Terpenoid MVK medium pass
Pspiscaffold_60139640 Terpenoid MVK low borderline
Pspiscaffold_70197640 Terpenoid MVK low borderline
Pspiscaffold_60118240 Terpenoid PMK medium pass
Pspiscaffold_90259390 Terpenoid TPS medium pass
Pspiscaffold_90259400 Terpenoid TPS low borderline
Pspiscaffold_90259410 Terpenoid TPS medium pass
Pspiscaffold_90291100 Terpenoid TPS medium pass
Pspiscaffold_10001780 Terpenoid UGT medium pass
Pspiscaffold_10014150 Terpenoid UGT medium pass
Pspiscaffold_20041960 Terpenoid UGT medium pass
Pspiscaffold_20041970 Terpenoid UGT low borderline
Pspiscaffold_20046080 Terpenoid UGT medium pass
Pspiscaffold_30066980 Terpenoid UGT medium pass
Pspiscaffold_40081390 Terpenoid UGT medium pass
Pspiscaffold_40081400 Terpenoid UGT medium pass
Pspiscaffold_40081420 Terpenoid UGT medium pass
Pspiscaffold_40081440 Terpenoid UGT medium pass
Pspiscaffold_40081480 Terpenoid UGT medium pass
Pspiscaffold_40086160 Terpenoid UGT medium pass
Pspiscaffold_50106910 Terpenoid UGT medium pass
Pspiscaffold_50106970 Terpenoid UGT medium pass
Pspiscaffold_60131300 Terpenoid UGT medium pass
Pspiscaffold_60134170 Terpenoid UGT low borderline
Pspiscaffold_60134890 Terpenoid UGT medium pass
Pspiscaffold_60142280 Terpenoid UGT medium pass
Pspiscaffold_70162090 Terpenoid UGT medium pass
Pspiscaffold_70186880 Terpenoid UGT medium pass
Pspiscaffold_70200680 Terpenoid UGT medium pass