PlantSME Plant secondary metabolism enzyme database

Pyrrhobryum spiniforme (pyrrhobryum_spiniforme)

Imported from atlas release summary for Pyrrhobryum spiniforme.

757
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 175 10 POD (83) View species results
Alkaloid pathway 166 16 PYKS (51) View species results
Terpenoid pathway 150 19 BAHD (65) View species results
Flavonoid pathway 141 9 CHS (61) View species results
Rosmarinic acid pathway 82 7 C4H (31) View species results
Steroid pathway 43 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 631 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Pspiscaffold_60146910 Alkaloid NMT medium borderline
Pspiscaffold_70148780 Alkaloid NMT low borderline
Pspiscaffold_70152830 Alkaloid NMT medium pass
Pspiscaffold_70152850 Alkaloid NMT medium pass
Pspiscaffold_70160970 Alkaloid NMT low borderline
Pspiscaffold_70161090 Alkaloid NMT low borderline
Pspiscaffold_70161550 Alkaloid NMT medium pass
Pspiscaffold_70163300 Alkaloid NMT medium pass
Pspiscaffold_70163320 Alkaloid NMT low borderline
Pspiscaffold_70163330 Alkaloid NMT medium pass
Pspiscaffold_70176120 Alkaloid NMT low borderline
Pspiscaffold_70181890 Alkaloid NMT medium pass
Pspiscaffold_70185640 Alkaloid NMT medium borderline
Pspiscaffold_70198740 Alkaloid NMT medium pass
Pspiscaffold_70198760 Alkaloid NMT medium pass
Pspiscaffold_80209780 Alkaloid NMT low borderline
Pspiscaffold_80211510 Alkaloid NMT medium pass
Pspiscaffold_80212650 Alkaloid NMT medium borderline
Pspiscaffold_80217410 Alkaloid NMT low borderline
Pspiscaffold_80218740 Alkaloid NMT medium pass
Pspiscaffold_80219020 Alkaloid NMT medium pass
Pspiscaffold_80234830 Alkaloid NMT low borderline
Pspiscaffold_80236070 Alkaloid NMT medium borderline
Pspiscaffold_80242290 Alkaloid NMT low borderline
Pspiscaffold_80244880 Alkaloid NMT medium pass
Pspiscaffold_90263850 Alkaloid NMT low borderline
Pspiscaffold_90270650 Alkaloid NMT low borderline
Pspiscaffold_90271070 Alkaloid NMT medium pass
Pspiscaffold_90272080 Alkaloid NMT medium pass
Pspiscaffold_90284870 Alkaloid NMT low borderline
Pspiscaffold_90290950 Alkaloid NMT medium borderline
Pspiscaffold_90290980 Alkaloid NMT medium borderline
Pspiscaffold_90292820 Alkaloid NMT low borderline
Pspiscaffold_90296210 Alkaloid NMT medium pass
Pspiscaffold_90294560 Alkaloid ODC low borderline
Pspiscaffold_20049310 Alkaloid PMT medium pass
Pspiscaffold_20049320 Alkaloid PMT low borderline
Pspiscaffold_30060300 Alkaloid PMT low borderline
Pspiscaffold_50109630 Alkaloid PMT low borderline
Pspiscaffold_60133470 Alkaloid PMT medium pass
Pspiscaffold_60137620 Alkaloid PMT low borderline
Pspiscaffold_60140300 Alkaloid PMT medium borderline
Pspiscaffold_70186610 Alkaloid PMT low borderline
Pspiscaffold_70197510 Alkaloid PMT medium pass
Pspiscaffold_730205400 Alkaloid PMT low borderline
Pspiscaffold_10005930 Alkaloid PYKS low borderline
Pspiscaffold_10013210 Alkaloid PYKS medium pass
Pspiscaffold_10019260 Alkaloid PYKS low borderline
Pspiscaffold_10019710 Alkaloid PYKS low borderline
Pspiscaffold_110027130 Alkaloid PYKS low borderline