PlantSME Plant secondary metabolism enzyme database

Pyrrhobryum spiniforme (pyrrhobryum_spiniforme)

Imported from atlas release summary for Pyrrhobryum spiniforme.

757
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 175 10 POD (83) View species results
Alkaloid pathway 166 16 PYKS (51) View species results
Terpenoid pathway 150 19 BAHD (65) View species results
Flavonoid pathway 141 9 CHS (61) View species results
Rosmarinic acid pathway 82 7 C4H (31) View species results
Steroid pathway 43 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 631 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Pspiscaffold_20040780 Alkaloid PYKS medium pass
Pspiscaffold_20042670 Alkaloid PYKS high pass
Pspiscaffold_20043250 Alkaloid PYKS high pass
Pspiscaffold_20043270 Alkaloid PYKS high pass
Pspiscaffold_20043280 Alkaloid PYKS high pass
Pspiscaffold_20043290 Alkaloid PYKS medium pass
Pspiscaffold_20044790 Alkaloid PYKS medium pass
Pspiscaffold_20052260 Alkaloid PYKS medium pass
Pspiscaffold_30062150 Alkaloid PYKS medium pass
Pspiscaffold_30062160 Alkaloid PYKS low borderline
Pspiscaffold_30067200 Alkaloid PYKS medium pass
Pspiscaffold_30067990 Alkaloid PYKS high pass
Pspiscaffold_30068280 Alkaloid PYKS medium pass
Pspiscaffold_30071890 Alkaloid PYKS low borderline
Pspiscaffold_40077060 Alkaloid PYKS medium pass
Pspiscaffold_40089190 Alkaloid PYKS low borderline
Pspiscaffold_50101240 Alkaloid PYKS low borderline
Pspiscaffold_50107370 Alkaloid PYKS medium pass
Pspiscaffold_60121840 Alkaloid PYKS low borderline
Pspiscaffold_60128600 Alkaloid PYKS low borderline
Pspiscaffold_70151190 Alkaloid PYKS high pass
Pspiscaffold_70151230 Alkaloid PYKS high pass
Pspiscaffold_70151380 Alkaloid PYKS high pass
Pspiscaffold_70175930 Alkaloid PYKS high pass
Pspiscaffold_70178000 Alkaloid PYKS low borderline
Pspiscaffold_70179090 Alkaloid PYKS low borderline
Pspiscaffold_70181820 Alkaloid PYKS high pass
Pspiscaffold_70181880 Alkaloid PYKS medium pass
Pspiscaffold_70182290 Alkaloid PYKS high pass
Pspiscaffold_70183540 Alkaloid PYKS high pass
Pspiscaffold_70184110 Alkaloid PYKS high pass
Pspiscaffold_70184180 Alkaloid PYKS high pass
Pspiscaffold_70184200 Alkaloid PYKS medium pass
Pspiscaffold_70184210 Alkaloid PYKS high pass
Pspiscaffold_70184220 Alkaloid PYKS high pass
Pspiscaffold_70184230 Alkaloid PYKS high pass
Pspiscaffold_70184250 Alkaloid PYKS high pass
Pspiscaffold_70184310 Alkaloid PYKS high pass
Pspiscaffold_70188300 Alkaloid PYKS high pass
Pspiscaffold_80219240 Alkaloid PYKS high pass
Pspiscaffold_80219250 Alkaloid PYKS high pass
Pspiscaffold_80222720 Alkaloid PYKS medium pass
Pspiscaffold_80233860 Alkaloid PYKS high pass
Pspiscaffold_80233880 Alkaloid PYKS medium pass
Pspiscaffold_80233890 Alkaloid PYKS high pass
Pspiscaffold_80233980 Alkaloid PYKS high pass
Pspiscaffold_80240990 Alkaloid PYKS high pass
Pspiscaffold_80241000 Alkaloid PYKS high pass
Pspiscaffold_80254130 Alkaloid PYKS low borderline
Pspiscaffold_90262220 Alkaloid PYKS low borderline