Pyrrhobryum spiniforme (pyrrhobryum_spiniforme)
Imported from atlas release summary for Pyrrhobryum spiniforme.
958
Candidate Protein Records
757
Pathway-Level Records
1812
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1812
Family-Level Calls
C4H
6.84%
BAHD
5.46%
C3'H/CYP98A
5.3%
POD
4.97%
4CL
4.47%
PAL
4.3%
CYP76
3.81%
PYKS
3.7%
Other Families
61.15%
More Families (97)
NMT
64
3.53%
CHS
64
3.53%
IFS
49
2.7%
F3H
44
2.43%
BR6OX2/CYP85A2
41
2.26%
STR
40
2.21%
T3O
39
2.15%
F3'H/CYP75B
39
2.15%
GS
37
2.04%
IFR
37
2.04%
DWF4/CYP90B1
37
2.04%
UFGT
30
1.66%
UGT
30
1.66%
7DLGT
29
1.6%
CODM/T6ODM
28
1.55%
CAD
23
1.27%
IO
22
1.21%
T16H
21
1.16%
SMT1/SMT2/SMT3
21
1.16%
CYP71
18
0.99%
H6H
17
0.94%
CAS
17
0.94%
LAC
15
0.83%
COMT
14
0.77%
SLS
13
0.72%
NCS
13
0.72%
RAS
13
0.72%
HCT
12
0.66%
7DLH
11
0.61%
SGD
10
0.55%
PMT
10
0.55%
F3'5'H/CYP75A
10
0.55%
TRI/TRII
9
0.5%
CSE
9
0.5%
CNMT
8
0.44%
8HGO
8
0.44%
COR
8
0.44%
CPD/CYP90A1
8
0.44%
SQS/FDFT1
8
0.44%
CYP90D1
8
0.44%
CCR
7
0.39%
BR6OX1/CYP85A1
7
0.39%
G8O/G8H
6
0.33%
16OMT
6
0.33%
FNS
6
0.33%
HDS/IspG
6
0.33%
BBE
5
0.28%
ANR
5
0.28%
TAT
5
0.28%
CPR
5
0.28%
DWF5
5
0.28%
DWF1
5
0.28%
GGPPS
5
0.28%
AACT
5
0.28%
TDC
4
0.22%
MPO
4
0.22%
LAMT
4
0.22%
GES
4
0.22%
CHI
4
0.22%
F5H/CYP84A
4
0.22%
MVK
4
0.22%
TPS
4
0.22%
TYDC_DDC
3
0.17%
ISY
3
0.17%
DFR
3
0.17%
SQE
3
0.17%
DET2
3
0.17%
ROT3/CYP90C1
3
0.17%
SMO1/SMO2
3
0.17%
HYD1
3
0.17%
ADC
2
0.11%
CYP719
2
0.11%
FLS
2
0.11%
ANS/LDOX
2
0.11%
CCoAOMT
2
0.11%
CYP51G1
2
0.11%
FPPS
2
0.11%
HMGS
2
0.11%
HDR/IspH
2
0.11%
MVD
2
0.11%
DXR
2
0.11%
MCT/IspD
2
0.11%
DXS
2
0.11%
XMT_MXMT_DXMT
1
0.06%
CYP80F1
1
0.06%
CYP80B1
1
0.06%
6OMT_4OMT_SOMT
1
0.06%
ODC
1
0.06%
HPPR
1
0.06%
CPI1
1
0.06%
FK
1
0.06%
DWF7
1
0.06%
IDI
1
0.06%
CMK/IspE
1
0.06%
MDS/IspF
1
0.06%
PMK
1
0.06%
HMGR
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 175 | 10 | POD (83) | View species results |
| Alkaloid pathway | 166 | 16 | PYKS (51) | View species results |
| Terpenoid pathway | 150 | 19 | BAHD (65) | View species results |
| Flavonoid pathway | 141 | 9 | CHS (61) | View species results |
| Rosmarinic acid pathway | 82 | 7 | C4H (31) | View species results |
| Steroid pathway | 43 | 12 | CAS (14) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 631 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 124 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Pspiscaffold_90262230 | Alkaloid | PYKS | medium | pass |
| Pspiscaffold_90270290 | Alkaloid | PYKS | medium | pass |
| Pspiscaffold_90270920 | Alkaloid | PYKS | low | borderline |
| Pspiscaffold_90271280 | Alkaloid | PYKS | high | pass |
| Pspiscaffold_90271300 | Alkaloid | PYKS | high | pass |
| Pspiscaffold_90281660 | Alkaloid | PYKS | medium | pass |
| Pspiscaffold_90282770 | Alkaloid | PYKS | medium | pass |
| Pspiscaffold_90282780 | Alkaloid | PYKS | low | borderline |
| Pspiscaffold_90284020 | Alkaloid | PYKS | medium | pass |
| Pspiscaffold_90293470 | Alkaloid | PYKS | medium | pass |
| Pspiscaffold_90296480 | Alkaloid | PYKS | medium | pass |
| Pspiscaffold_90297050 | Alkaloid | PYKS | high | pass |
| Pspiscaffold_1030026320 | Alkaloid | SGD | medium | pass |
| Pspiscaffold_1030026330 | Alkaloid | SGD | medium | pass |
| Pspiscaffold_40078070 | Alkaloid | SGD | medium | pass |
| Pspiscaffold_70156640 | Alkaloid | SGD | medium | pass |
| Pspiscaffold_790206320 | Alkaloid | SGD | medium | pass |
| Pspiscaffold_80223680 | Alkaloid | SGD | low | borderline |
| Pspiscaffold_80249400 | Alkaloid | SGD | medium | pass |
| Pspiscaffold_90278250 | Alkaloid | SGD | low | borderline |
| Pspiscaffold_90281550 | Alkaloid | SGD | medium | pass |
| Pspiscaffold_90293740 | Alkaloid | SGD | medium | pass |
| Pspiscaffold_10002640 | Alkaloid | SLS | medium | borderline |
| Pspiscaffold_10011180 | Alkaloid | SLS | medium | borderline |
| Pspiscaffold_540117010 | Alkaloid | SLS | medium | borderline |
| Pspiscaffold_60146610 | Alkaloid | SLS | medium | borderline |
| Pspiscaffold_60146720 | Alkaloid | SLS | medium | borderline |
| Pspiscaffold_70176870 | Alkaloid | SLS | medium | borderline |
| Pspiscaffold_80210880 | Alkaloid | SLS | medium | borderline |
| Pspiscaffold_80231580 | Alkaloid | SLS | medium | borderline |
| Pspiscaffold_80231810 | Alkaloid | SLS | medium | borderline |
| Pspiscaffold_80231840 | Alkaloid | SLS | medium | borderline |
| Pspiscaffold_80241820 | Alkaloid | SLS | medium | borderline |
| Pspiscaffold_80244980 | Alkaloid | SLS | medium | borderline |
| Pspiscaffold_910299160 | Alkaloid | SLS | medium | borderline |
| Pspiscaffold_100023190 | Alkaloid | STR | low | borderline |
| Pspiscaffold_100024920 | Alkaloid | STR | low | borderline |
| Pspiscaffold_10012490 | Alkaloid | STR | low | borderline |
| Pspiscaffold_10020130 | Alkaloid | STR | low | borderline |
| Pspiscaffold_110030790 | Alkaloid | STR | medium | pass |
| Pspiscaffold_20041540 | Alkaloid | STR | low | borderline |
| Pspiscaffold_20042780 | Alkaloid | STR | low | borderline |
| Pspiscaffold_20046600 | Alkaloid | STR | low | borderline |
| Pspiscaffold_20049770 | Alkaloid | STR | medium | pass |
| Pspiscaffold_20051670 | Alkaloid | STR | low | borderline |
| Pspiscaffold_30065460 | Alkaloid | STR | low | borderline |
| Pspiscaffold_30072550 | Alkaloid | STR | low | borderline |
| Pspiscaffold_40080890 | Alkaloid | STR | medium | pass |
| Pspiscaffold_50091150 | Alkaloid | STR | medium | pass |
| Pspiscaffold_50112550 | Alkaloid | STR | low | borderline |