PlantSME Plant secondary metabolism enzyme database

Raddia guianensis (raddia_guianensis)

Imported from atlas release summary for Raddia guianensis.

1868
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 487 19 UGT (181) View species results
Phenylpropanoid pathway 423 11 POD (182) View species results
Alkaloid pathway 403 23 7DLGT (93) View species results
Flavonoid pathway 273 13 UFGT (153) View species results
Rosmarinic acid pathway 187 7 C4H (78) View species results
Steroid pathway 95 14 CAS (40) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1701 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 282 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C3'H/CYP98A
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Gene Pathway Family Confidence Status
Rgu000093 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu000497 Phenylpropanoid C3'H/CYP98A high pass
Rgu000670 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu000742 Phenylpropanoid C3'H/CYP98A low borderline
Rgu000789 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu000849 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu000892 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu001094 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu001136 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu001144 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu001201 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu001281 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu001385 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu001470 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu001532 Phenylpropanoid C3'H/CYP98A low borderline
Rgu001559 Phenylpropanoid C3'H/CYP98A low borderline
Rgu001757 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu001758 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu001955 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu002214 Phenylpropanoid C3'H/CYP98A medium pass
Rgu002540 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu002784 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu002876 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu002941 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu003336 Phenylpropanoid C3'H/CYP98A high pass
Rgu003366 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu003367 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu003369 Phenylpropanoid C3'H/CYP98A low borderline
Rgu003567 Phenylpropanoid C3'H/CYP98A low borderline
Rgu004074 Phenylpropanoid C3'H/CYP98A low borderline
Rgu004123 Phenylpropanoid C3'H/CYP98A low borderline
Rgu004253 Phenylpropanoid C3'H/CYP98A low borderline
Rgu004266 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu004294 Phenylpropanoid C3'H/CYP98A low borderline
Rgu004463 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu004504 Phenylpropanoid C3'H/CYP98A low borderline
Rgu004734 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu004830 Phenylpropanoid C3'H/CYP98A low borderline
Rgu004849 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu004913 Phenylpropanoid C3'H/CYP98A low borderline
Rgu004940 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu004941 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu005195 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu005245 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu005246 Phenylpropanoid C3'H/CYP98A high pass
Rgu005308 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu005317 Phenylpropanoid C3'H/CYP98A low borderline
Rgu005555 Phenylpropanoid C3'H/CYP98A medium borderline
Rgu005575 Phenylpropanoid C3'H/CYP98A low borderline
Rgu006224 Phenylpropanoid C3'H/CYP98A low borderline