PlantSME Plant secondary metabolism enzyme database

Raddia guianensis (raddia_guianensis)

Imported from atlas release summary for Raddia guianensis.

1868
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 487 19 UGT (181) View species results
Phenylpropanoid pathway 423 11 POD (182) View species results
Alkaloid pathway 403 23 7DLGT (93) View species results
Flavonoid pathway 273 13 UFGT (153) View species results
Rosmarinic acid pathway 187 7 C4H (78) View species results
Steroid pathway 95 14 CAS (40) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1701 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 282 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status Best Target
Rgu000182 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Rgu001185 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Rgu001891 Phenylpropanoid CAD low borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Rgu002837 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Rgu003260 Phenylpropanoid CAD low borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Rgu003339 Phenylpropanoid CAD medium pass CAD__00007__sp_O24562_CADH_MAIZE
Rgu003853 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
Rgu004939 Phenylpropanoid CAD low borderline CAD__00001__sp_A0A072VPZ8_CAD1_MEDTR
Rgu004949 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Rgu005543 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Rgu006342 Phenylpropanoid CAD medium pass CAD__00007__sp_O24562_CADH_MAIZE
Rgu007583 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Rgu007897 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
Rgu008067 Phenylpropanoid CAD medium pass CAD__00012__sp_Q02972_CADH8_ARATH
Rgu008819 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Rgu009060 Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
Rgu009820 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Rgu010738 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
Rgu010739 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
Rgu012030 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Rgu012272 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Rgu012383 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Rgu013212 Phenylpropanoid CAD medium pass CAD__00007__sp_O24562_CADH_MAIZE
Rgu013336 Phenylpropanoid CAD medium pass CAD__00016__sp_Q9SJ10_CADH3_ARATH
Rgu013337 Phenylpropanoid CAD medium pass CAD__00009__sp_P42734_CADH9_ARATH
Rgu013621 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Rgu013622 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
Rgu014053 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Rgu014177 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Rgu014373 Phenylpropanoid CAD medium pass CAD__00011__sp_Q02971_CADH7_ARATH
Rgu014848 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
Rgu015190 Phenylpropanoid CAD low borderline CAD__00012__sp_Q02972_CADH8_ARATH
Rgu015208 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Rgu015472 Phenylpropanoid CAD medium pass CAD__00013__sp_Q0JA75_CADH7_ORYSJ
Rgu016013 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Rgu016578 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Rgu017235 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Rgu017509 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Rgu018014 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Rgu019321 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
Rgu019863 Phenylpropanoid CAD medium pass CAD__00012__sp_Q02972_CADH8_ARATH
Rgu019973 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Rgu020115 Phenylpropanoid CAD low borderline CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Rgu020259 Phenylpropanoid CAD medium pass CAD__00012__sp_Q02972_CADH8_ARATH
Rgu020274 Phenylpropanoid CAD medium pass CAD__00004__sp_B5LAT8_CAD1_CAPAN
Rgu021198 Phenylpropanoid CAD medium pass CAD__00017__sp_Q9SJ25_CADH2_ARATH
Rgu021228 Phenylpropanoid CAD medium pass CAD__00012__sp_Q02972_CADH8_ARATH
Rgu021242 Phenylpropanoid CAD medium pass CAD__00017__sp_Q9SJ25_CADH2_ARATH
Rgu021335 Phenylpropanoid CAD medium pass CAD__00014__sp_Q2KNL5_CADH1_OCIBA
Rgu021554 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE