PlantSME Plant secondary metabolism enzyme database

Raddia guianensis (raddia_guianensis)

Imported from atlas release summary for Raddia guianensis.

1868
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 487 19 UGT (181) View species results
Phenylpropanoid pathway 423 11 POD (182) View species results
Alkaloid pathway 403 23 7DLGT (93) View species results
Flavonoid pathway 273 13 UFGT (153) View species results
Rosmarinic acid pathway 187 7 C4H (78) View species results
Steroid pathway 95 14 CAS (40) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1701 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 282 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
Rgu000670 Alkaloid IO medium borderline
Rgu001955 Alkaloid IO medium borderline
Rgu002784 Alkaloid IO medium borderline
Rgu002876 Alkaloid IO medium borderline
Rgu004253 Alkaloid IO medium pass
Rgu005245 Alkaloid IO medium borderline
Rgu005246 Alkaloid IO medium borderline
Rgu005703 Alkaloid IO low borderline
Rgu008984 Alkaloid IO medium borderline
Rgu009011 Alkaloid IO low borderline
Rgu010526 Alkaloid IO medium borderline
Rgu010990 Alkaloid IO medium pass
Rgu015734 Alkaloid IO medium borderline
Rgu015846 Alkaloid IO low borderline
Rgu016622 Alkaloid IO medium borderline
Rgu016868 Alkaloid IO medium borderline
Rgu018572 Alkaloid IO medium borderline
Rgu018756 Alkaloid IO medium pass
Rgu022290 Alkaloid IO low borderline
Rgu023498 Alkaloid IO medium borderline
Rgu023833 Alkaloid IO medium pass
Rgu024025 Alkaloid IO low borderline
Rgu024208 Alkaloid IO medium borderline